Difference between revisions of "SJ17079"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ05198 == * transcription-direction: ** negative * right-end-position: ** 316553 * left-end-position: ** 310697 * centisome-position: ** 62.071247...")
(Created page with "Category:gene == Gene SJ17964 == * transcription-direction: ** positive * right-end-position: ** 3293 * left-end-position: ** 13 * centisome-position: ** 0.38922158 ==...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05198 ==
+
== Gene SJ17964 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 316553
+
** 3293
 
* left-end-position:
 
* left-end-position:
−
** 310697
+
** 13
 
* centisome-position:
 
* centisome-position:
−
** 62.071247    
+
** 0.38922158    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-9839]]
+
* [[F16ALDOLASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8631]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6082]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
* [[CALVIN-PWY]]
−
* [[PWY-6073]]
+
** '''12''' reactions found over '''13''' reactions in the full pathway
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
* [[GLUCONEO-PWY]]
−
{{#set: transcription-direction=negative}}
+
** '''12''' reactions found over '''13''' reactions in the full pathway
−
{{#set: right-end-position=316553}}
+
* [[PWY-7385]]
−
{{#set: left-end-position=310697}}
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
{{#set: centisome-position=62.071247   }}
+
* [[P341-PWY]]
 +
** '''6''' reactions found over '''10''' reactions in the full pathway
 +
* [[GLYCOLYSIS]]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[ANAGLYCOLYSIS-PWY]]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY66-399]]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-1042]]
 +
** '''9''' reactions found over '''10''' reactions in the full pathway
 +
* [[SUCSYN-PWY]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[P185-PWY]]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-1861]]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5484]]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6142]]
 +
** '''10''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY66-373]]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=3293}}
 +
{{#set: left-end-position=13}}
 +
{{#set: centisome-position=0.38922158   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=14}}

Revision as of 13:06, 14 January 2021

Gene SJ17964

  • transcription-direction:
    • positive
  • right-end-position:
    • 3293
  • left-end-position:
    • 13
  • centisome-position:
    • 0.38922158

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • CALVIN-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • GLUCONEO-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • PWY-7385
    • 7 reactions found over 9 reactions in the full pathway
  • P341-PWY
    • 6 reactions found over 10 reactions in the full pathway
  • GLYCOLYSIS
    • 11 reactions found over 12 reactions in the full pathway
  • ANAGLYCOLYSIS-PWY
    • 10 reactions found over 11 reactions in the full pathway
  • PWY66-399
    • 11 reactions found over 12 reactions in the full pathway
  • PWY-1042
    • 9 reactions found over 10 reactions in the full pathway
  • SUCSYN-PWY
    • 6 reactions found over 7 reactions in the full pathway
  • P185-PWY
    • 11 reactions found over 12 reactions in the full pathway
  • PWY-1861
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-5484
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-6142
    • 10 reactions found over 13 reactions in the full pathway
  • PWY66-373
    • 3 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17079&oldid=84176"