Difference between revisions of "SJ17079"

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(Created page with "Category:gene == Gene SJ17964 == * transcription-direction: ** positive * right-end-position: ** 3293 * left-end-position: ** 13 * centisome-position: ** 0.38922158 ==...")
(Created page with "Category:gene == Gene SJ19827 == * transcription-direction: ** negative * right-end-position: ** 59183 * left-end-position: ** 12426 * centisome-position: ** 5.664816...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ17964 ==
+
== Gene SJ19827 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 3293
+
** 59183
 
* left-end-position:
 
* left-end-position:
−
** 13
+
** 12426
 
* centisome-position:
 
* centisome-position:
−
** 0.38922158    
+
** 5.664816    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[F16ALDOLASE-RXN]]
+
* [[2.4.1.101-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-8631]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[2.4.1.223-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[2.4.1.94-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7426]]
−
* [[CALVIN-PWY]]
+
** '''4''' reactions found over '''10''' reactions in the full pathway
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY-7920]]
−
* [[GLUCONEO-PWY]]
+
** '''2''' reactions found over '''11''' reactions in the full pathway
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY-6558]]
−
* [[PWY-7385]]
+
** '''7''' reactions found over '''13''' reactions in the full pathway
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
−
* [[P341-PWY]]
+
{{#set: right-end-position=59183}}
−
** '''6''' reactions found over '''10''' reactions in the full pathway
+
{{#set: left-end-position=12426}}
−
* [[GLYCOLYSIS]]
+
{{#set: centisome-position=5.664816   }}
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[ANAGLYCOLYSIS-PWY]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY66-399]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-1042]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[SUCSYN-PWY]]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[P185-PWY]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-1861]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5484]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-6142]]
 
−
** '''10''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY66-373]]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=3293}}
 
−
{{#set: left-end-position=13}}
 
−
{{#set: centisome-position=0.38922158   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=14}}
+
{{#set: nb pathway associated=3}}

Revision as of 18:51, 14 January 2021

Gene SJ19827

  • transcription-direction:
    • negative
  • right-end-position:
    • 59183
  • left-end-position:
    • 12426
  • centisome-position:
    • 5.664816

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7426
    • 4 reactions found over 10 reactions in the full pathway
  • PWY-7920
    • 2 reactions found over 11 reactions in the full pathway
  • PWY-6558
    • 7 reactions found over 13 reactions in the full pathway




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