Difference between revisions of "SJ17114"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ02214 == * transcription-direction: ** positive * right-end-position: ** 96011 * left-end-position: ** 55580 * centisome-position: ** 39.7017 =...")
(Created page with "Category:gene == Gene SJ01345 == * transcription-direction: ** negative * right-end-position: ** 125475 * left-end-position: ** 120826 * centisome-position: ** 79.38059...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02214 ==
+
== Gene SJ01345 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 96011
+
** 125475
 
* left-end-position:
 
* left-end-position:
−
** 55580
+
** 120826
 
* centisome-position:
 
* centisome-position:
−
** 39.7017    
+
** 79.38059    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
+
* [[3.1.26.4-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[BIOTIN-CARBOXYL-RXN]]
+
* [[3PGAREARR-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[DALADALALIG-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[METHYLCROTONYL-COA-CARBOXYLASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[PWY-7388]]
+
* [[PWY-6142]]
−
** '''7''' reactions found over '''11''' reactions in the full pathway
+
** '''10''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-6679]]
+
* [[PWY-7003]]
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
** '''8''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-5744]]
+
* [[PWY-7218]]
−
** '''4''' reactions found over '''13''' reactions in the full pathway
+
** '''7''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5743]]
+
* [[GLYCOLYSIS]]
−
** '''5''' reactions found over '''13''' reactions in the full pathway
+
** '''11''' reactions found over '''12''' reactions in the full pathway
−
* [[PWY-5789]]
+
* [[P341-PWY]]
−
** '''8''' reactions found over '''18''' reactions in the full pathway
+
** '''6''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY0-1264]]
+
* [[PWY-5723]]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''10''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-7953]]
+
* [[P124-PWY]]
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''12''' reactions found over '''15''' reactions in the full pathway
−
* [[PWY-6386]]
+
* [[PWY-2221]]
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''6''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6387]]
+
* [[PWY-5484]]
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''10''' reactions found over '''11''' reactions in the full pathway
−
* [[LEU-DEG2-PWY]]
+
* [[PWY-1042]]
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''9''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6886]]
 +
** '''8''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6901]]
 +
** '''10''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7124]]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[GLUCONEO-PWY]]
 +
** '''12''' reactions found over '''13''' reactions in the full pathway
 
</div>
 
</div>
−
{{#set: transcription-direction=positive}}
+
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=96011}}
+
{{#set: right-end-position=125475}}
−
{{#set: left-end-position=55580}}
+
{{#set: left-end-position=120826}}
−
{{#set: centisome-position=39.7017   }}
+
{{#set: centisome-position=79.38059   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=10}}
+
{{#set: nb pathway associated=14}}

Revision as of 15:21, 5 January 2021

Gene SJ01345

  • transcription-direction:
    • negative
  • right-end-position:
    • 125475
  • left-end-position:
    • 120826
  • centisome-position:
    • 79.38059

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6142
    • 10 reactions found over 13 reactions in the full pathway
  • PWY-7003
    • 8 reactions found over 6 reactions in the full pathway
  • PWY-7218
    • 7 reactions found over 4 reactions in the full pathway
  • GLYCOLYSIS
    • 11 reactions found over 12 reactions in the full pathway
  • P341-PWY
    • 6 reactions found over 10 reactions in the full pathway
  • PWY-5723
    • 10 reactions found over 10 reactions in the full pathway
  • P124-PWY
    • 12 reactions found over 15 reactions in the full pathway
  • PWY-2221
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-5484
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-1042
    • 9 reactions found over 10 reactions in the full pathway
  • PWY-6886
    • 8 reactions found over 5 reactions in the full pathway
  • PWY-6901
    • 10 reactions found over 8 reactions in the full pathway
  • PWY-7124
    • 8 reactions found over 8 reactions in the full pathway
  • GLUCONEO-PWY
    • 12 reactions found over 13 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17114&oldid=70108"