Difference between revisions of "SJ17121"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ07762 == * transcription-direction: ** negative * right-end-position: ** 33939 * left-end-position: ** 27138 * centisome-position: ** 43.40205...")
 
(Created page with "Category:gene == Gene SJ17121 == * transcription-direction: ** positive * right-end-position: ** 254123 * left-end-position: ** 226816 * centisome-position: ** 83.88259...")
 
(9 intermediate revisions by 4 users not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07762 ==
+
== Gene SJ17121 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 33939
+
** 254123
 
* left-end-position:
 
* left-end-position:
−
** 27138
+
** 226816
 
* centisome-position:
 
* centisome-position:
−
** 43.40205    
+
** 83.88259    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[CARBODEHYDRAT-RXN]]
+
* [[RXN-15559]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-15560]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-5224]]
+
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6142]]
+
* [[PWY-7511]]
−
** '''10''' reactions found over '''13''' reactions in the full pathway
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7115]]
+
{{#set: transcription-direction=positive}}
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
{{#set: right-end-position=254123}}
−
* [[PWYQT-4429]]
+
{{#set: left-end-position=226816}}
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
{{#set: centisome-position=83.88259   }}
−
* [[CYANCAT-PWY]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5744]]
 
−
** '''4''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-5789]]
 
−
** '''8''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-7117]]
 
−
** '''10''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-5743]]
 
−
** '''5''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-241]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=33939}}
 
−
{{#set: left-end-position=27138}}
 
−
{{#set: centisome-position=43.40205   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=9}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:05, 18 March 2021

Gene SJ17121

  • transcription-direction:
    • positive
  • right-end-position:
    • 254123
  • left-end-position:
    • 226816
  • centisome-position:
    • 83.88259

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7511
    • 7 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17121&oldid=133933"