Difference between revisions of "SJ17178"

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(Created page with "Category:gene == Gene SJ02209 == * transcription-direction: ** positive * right-end-position: ** 65089 * left-end-position: ** 64196 * centisome-position: ** 45.78234...")
(Created page with "Category:gene == Gene SJ14191 == * transcription-direction: ** positive * right-end-position: ** 273437 * left-end-position: ** 242565 * centisome-position: ** 74.9092...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02209 ==
+
== Gene SJ14191 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 65089
+
** 273437
 
* left-end-position:
 
* left-end-position:
−
** 64196
+
** 242565
 
* centisome-position:
 
* centisome-position:
−
** 45.78234    
+
** 74.9092    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3.1.26.4-RXN]]
+
* [[1.1.1.39-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[DNA-DIRECTED-DNA-POLYMERASE-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[MALIC-NADP-RXN]]
−
* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[OXALODECARB-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
== Pathway(s) associated ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PWY-7118]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[GLUCONEO-PWY]]
 +
** '''12''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-7115]]
 +
** '''9''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7686]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-3641]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7384]]
 +
** '''6''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7117]]
 +
** '''10''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-241]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[P184-PWY]]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6339]]
 +
** '''2''' reactions found over '''9''' reactions in the full pathway
 +
* [[METHYLGALLATE-DEGRADATION-PWY]]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=65089}}
+
{{#set: right-end-position=273437}}
−
{{#set: left-end-position=64196}}
+
{{#set: left-end-position=242565}}
−
{{#set: centisome-position=45.78234   }}
+
{{#set: centisome-position=74.9092   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=3}}
 
{{#set: nb reaction associated=3}}
 +
{{#set: nb pathway associated=11}}

Revision as of 09:25, 27 August 2019

Gene SJ14191

  • transcription-direction:
    • positive
  • right-end-position:
    • 273437
  • left-end-position:
    • 242565
  • centisome-position:
    • 74.9092

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7118
    • 5 reactions found over 6 reactions in the full pathway
  • GLUCONEO-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • PWY-7115
    • 9 reactions found over 10 reactions in the full pathway
  • PWY-7686
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-3641
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7384
    • 6 reactions found over 10 reactions in the full pathway
  • PWY-7117
    • 10 reactions found over 12 reactions in the full pathway
  • PWY-241
    • 5 reactions found over 6 reactions in the full pathway
  • P184-PWY
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-6339
    • 2 reactions found over 9 reactions in the full pathway
  • METHYLGALLATE-DEGRADATION-PWY
    • 2 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17178&oldid=29879"