Difference between revisions of "SJ17269"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ11297 == * transcription-direction: ** negative * right-end-position: ** 440735 * left-end-position: ** 430484 * centisome-position: ** 54.939716...")
(Created page with "Category:gene == Gene SJ17269 == * transcription-direction: ** negative * right-end-position: ** 151007 * left-end-position: ** 148252 * centisome-position: ** 55.673973...")
 
(4 intermediate revisions by 2 users not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ11297 ==
+
== Gene SJ17269 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 440735
+
** 151007
 
* left-end-position:
 
* left-end-position:
−
** 430484
+
** 148252
 
* centisome-position:
 
* centisome-position:
−
** 54.939716    
+
** 55.673973    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[3.5.2.17-RXN]]
−
* [[2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-11754]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-14177]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-9227]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9235]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9242]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN3O-54]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-5691]]
−
* [[PWY-6708]]
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
** '''5''' reactions found over '''8''' reactions in the full pathway
+
* [[PWY-7394]]
−
* [[PWY-5870]]
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
** '''4''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-7849]]
−
* [[PWY-5855]]
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
** '''3''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5873]]
 
−
** '''3''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5857]]
 
−
** '''3''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5872]]
 
−
** '''3''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5856]]
 
−
** '''3''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5871]]
 
−
** '''3''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7230]]
 
−
** '''3''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7233]]
 
−
** '''3''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY3O-19]]
 
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=440735}}
+
{{#set: right-end-position=151007}}
−
{{#set: left-end-position=430484}}
+
{{#set: left-end-position=148252}}
−
{{#set: centisome-position=54.939716   }}
+
{{#set: centisome-position=55.673973   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=11}}
+
{{#set: nb pathway associated=3}}

Latest revision as of 11:06, 18 March 2021

Gene SJ17269

  • transcription-direction:
    • negative
  • right-end-position:
    • 151007
  • left-end-position:
    • 148252
  • centisome-position:
    • 55.673973

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5691
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7394
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7849
    • 2 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17269&oldid=134534"