Difference between revisions of "SJ17301"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ02176 == * transcription-direction: ** positive * right-end-position: ** 274685 * left-end-position: ** 239847 * centisome-position: ** 44.129677...")
(Created page with "Category:gene == Gene SJ01770 == * transcription-direction: ** negative * right-end-position: ** 122226 * left-end-position: ** 112708 * centisome-position: ** 77.187744...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02176 ==
+
== Gene SJ01770 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 274685
+
** 122226
 
* left-end-position:
 
* left-end-position:
−
** 239847
+
** 112708
 
* centisome-position:
 
* centisome-position:
−
** 44.129677    
+
** 77.187744    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[DNA-DIRECTED-RNA-POLYMERASE-RXN]]
+
* [[PEROXID-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-14240]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
{{#set: transcription-direction=positive}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: right-end-position=274685}}
+
* [[RXN-15288]]
−
{{#set: left-end-position=239847}}
+
** Category: [[annotation]]
−
{{#set: centisome-position=44.129677   }}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
* [[RXN-17352]]
−
{{#set: nb reaction associated=1}}
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8635]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-7214]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7445]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5466]]
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6824]]
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-5469]]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5461]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=122226}}
 +
{{#set: left-end-position=112708}}
 +
{{#set: centisome-position=77.187744   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=6}}

Revision as of 14:46, 5 January 2021

Gene SJ01770

  • transcription-direction:
    • negative
  • right-end-position:
    • 122226
  • left-end-position:
    • 112708
  • centisome-position:
    • 77.187744

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17301&oldid=54813"