Difference between revisions of "SJ17320"

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(Created page with "Category:gene == Gene SJ04949 == * transcription-direction: ** negative * right-end-position: ** 189145 * left-end-position: ** 177283 * centisome-position: ** 18.359234...")
(Created page with "Category:gene == Gene SJ17320 == * transcription-direction: ** negative * right-end-position: ** 195145 * left-end-position: ** 184636 * centisome-position: ** 69.91246...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04949 ==
+
== Gene SJ17320 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 189145
+
** 195145
 
* left-end-position:
 
* left-end-position:
−
** 177283
+
** 184636
 
* centisome-position:
 
* centisome-position:
−
** 18.359234    
+
** 69.91246    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[SHIKIMATE-KINASE-RXN]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[F16BDEPHOS-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[SEDOHEPTULOSE-BISPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[SUGAR-PHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6163]]
+
* [[CALVIN-PWY]]
−
** '''6''' reactions found over '''5''' reactions in the full pathway
+
** '''12''' reactions found over '''13''' reactions in the full pathway
 +
* [[GLUCONEO-PWY]]
 +
** '''12''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5484]]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[GLYCOLYSIS]]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[P185-PWY]]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY66-399]]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[SUCSYN-PWY]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=189145}}
+
{{#set: right-end-position=195145}}
−
{{#set: left-end-position=177283}}
+
{{#set: left-end-position=184636}}
−
{{#set: centisome-position=18.359234   }}
+
{{#set: centisome-position=69.91246   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=7}}

Latest revision as of 11:08, 18 March 2021

Gene SJ17320

  • transcription-direction:
    • negative
  • right-end-position:
    • 195145
  • left-end-position:
    • 184636
  • centisome-position:
    • 69.91246

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • CALVIN-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • GLUCONEO-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • PWY-5484
    • 10 reactions found over 11 reactions in the full pathway
  • GLYCOLYSIS
    • 11 reactions found over 12 reactions in the full pathway
  • P185-PWY
    • 11 reactions found over 12 reactions in the full pathway
  • PWY66-399
    • 11 reactions found over 12 reactions in the full pathway
  • SUCSYN-PWY
    • 6 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17320&oldid=135342"