Difference between revisions of "SJ17350"

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(Created page with "Category:gene == Gene SJ13007 == * transcription-direction: ** positive * right-end-position: ** 103789 * left-end-position: ** 98947 * centisome-position: ** 28.510466...")
(Created page with "Category:gene == Gene SJ17350 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * RXN-12086 ** Category:...")
 
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[[Category:gene]]
 
[[Category:gene]]
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== Gene SJ13007 ==
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== Gene SJ17350 ==
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* transcription-direction:
 
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** positive
 
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* right-end-position:
 
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** 103789
 
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* left-end-position:
 
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** 98947
 
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* centisome-position:
 
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** 28.510466   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[RXN-12086]]
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* [[2-OCTAPRENYL-6-OHPHENOL-METHY-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[2.1.1.114-RXN]]
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* [[RXN-12579]]
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[2.1.1.64-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[DHHB-METHYLTRANSFER-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-11757]]
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* [[TRIACYLGLYCEROL-LIPASE-RXN]]
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** Category: [[annotation]]
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** Category: [[orthology]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-11758]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12160]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-9225]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-9229]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-9233]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-9237]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-9240]]
 
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** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-9280]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-9281]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-9282]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-9287]]
 
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** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN3O-102]]
 
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** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PWY-6857]]
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* [[PWY-6708]]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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** '''5''' reactions found over '''8''' reactions in the full pathway
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* [[LIPAS-PWY]]
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* [[PWY-7233]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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** '''3''' reactions found over '''10''' reactions in the full pathway
 
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* [[PWY-7235]]
 
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** '''3''' reactions found over '''n.a''' reactions in the full pathway
 
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* [[PWY3O-19]]
 
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** '''4''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-5856]]
 
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** '''3''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-5871]]
 
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** '''3''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-5870]]
 
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** '''4''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-5855]]
 
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** '''3''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-5873]]
 
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** '''3''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-5857]]
 
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** '''3''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-5872]]
 
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** '''3''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-7230]]
 
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** '''3''' reactions found over '''9''' reactions in the full pathway
 
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</div>
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=103789}}
 
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{{#set: left-end-position=98947}}
 
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{{#set: centisome-position=28.510466    }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=17}}
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{{#set: nb reaction associated=3}}
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{{#set: nb pathway associated=12}}
+
{{#set: nb pathway associated=2}}

Latest revision as of 11:06, 18 March 2021

Gene SJ17350

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway
  • LIPAS-PWY
    • 2 reactions found over 3 reactions in the full pathway


Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17350&oldid=134321"