Difference between revisions of "SJ17407"

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(Created page with "Category:gene == Gene SJ06121 == * transcription-direction: ** positive * right-end-position: ** 116824 * left-end-position: ** 80027 * centisome-position: ** 16.628712...")
(Created page with "Category:gene == Gene SJ04385 == * transcription-direction: ** positive * right-end-position: ** 72247 * left-end-position: ** 68570 * centisome-position: ** 63.592606...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ06121 ==
+
== Gene SJ04385 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 116824
+
** 72247
 
* left-end-position:
 
* left-end-position:
−
** 80027
+
** 68570
 
* centisome-position:
 
* centisome-position:
−
** 16.628712    
+
** 63.592606    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[BETA-UREIDOPROPIONASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** Category: [[orthology]]
+
* [[1.1.1.145-RXN]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[N-CARBAMOYLPUTRESCINE-AMIDASE-RXN]]
+
* [[RXN-12693]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12747]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12789]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-342]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-350]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-353]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[UDP-GLUCURONATE-4-EPIMERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-11210]]
+
</div>
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-3982]]
+
* [[PWY-6946]]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''6''' reactions found over '''22''' reactions in the full pathway
−
* [[PWY-43]]
+
* [[PWY-6944]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''25''' reactions in the full pathway
−
* [[ARGDEG-III-PWY]]
+
* [[PWY-6948]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''18''' reactions in the full pathway
−
* [[PWY-6430]]
+
* [[PWY66-378]]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7299]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-4861]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-6415]]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=116824}}
+
{{#set: right-end-position=72247}}
−
{{#set: left-end-position=80027}}
+
{{#set: left-end-position=68570}}
−
{{#set: centisome-position=16.628712   }}
+
{{#set: centisome-position=63.592606   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=8}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=7}}

Revision as of 11:11, 15 January 2021

Gene SJ04385

  • transcription-direction:
    • positive
  • right-end-position:
    • 72247
  • left-end-position:
    • 68570
  • centisome-position:
    • 63.592606

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6946
    • 6 reactions found over 22 reactions in the full pathway
  • PWY-6944
    • 2 reactions found over 25 reactions in the full pathway
  • PWY-6948
    • 2 reactions found over 18 reactions in the full pathway
  • PWY66-378
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-7299
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-4861
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6415
    • 4 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17407&oldid=110302"