Difference between revisions of "SJ17407"
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(Created page with "Category:gene == Gene SJ22197 == * transcription-direction: ** positive * right-end-position: ** 99188 * left-end-position: ** 93681 * centisome-position: ** 52.185028...") |
(Created page with "Category:gene == Gene SJ06121 == * transcription-direction: ** positive * right-end-position: ** 116824 * left-end-position: ** 80027 * centisome-position: ** 16.628712...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ06121 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 116824 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 80027 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 16.628712 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
− | * [[S. | + | * [[S.japonica_carotenoid_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[RXN- | + | * [[BETA-UREIDOPROPIONASE-RXN]] |
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[N-CARBAMOYLPUTRESCINE-AMIDASE-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
− | * [[ | + | * [[RXN-11210]] |
− | ** Category: [[ | + | ** Category: [[orthology]] |
− | *** source: [[ | + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | * [[PWY-3982]] |
− | ** ''' | + | ** '''1''' reactions found over '''3''' reactions in the full pathway |
+ | * [[PWY-43]] | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[ARGDEG-III-PWY]] | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-6430]] | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=116824}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=80027}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=16.628712 }} |
− | {{#set: organism associated=S. | + | {{#set: organism associated=S.japonica_carotenoid_curated}} |
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=4}} |
Revision as of 14:52, 5 January 2021
Contents
Gene SJ06121
- transcription-direction:
- positive
- right-end-position:
- 116824
- left-end-position:
- 80027
- centisome-position:
- 16.628712
Organism(s) associated with this gene
Reaction(s) associated
- BETA-UREIDOPROPIONASE-RXN
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- N-CARBAMOYLPUTRESCINE-AMIDASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-11210
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-3982
- 1 reactions found over 3 reactions in the full pathway
- PWY-43
- 3 reactions found over 3 reactions in the full pathway
- ARGDEG-III-PWY
- 3 reactions found over 3 reactions in the full pathway
- PWY-6430
- 1 reactions found over 3 reactions in the full pathway