Difference between revisions of "SJ17407"

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(Created page with "Category:gene == Gene SJ17677 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * BRANCHED-CHAINAMINOTRANS...")
(Created page with "Category:gene == Gene SJ06121 == * transcription-direction: ** positive * right-end-position: ** 116824 * left-end-position: ** 80027 * centisome-position: ** 16.628712...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ17677 ==
+
== Gene SJ06121 ==
 +
* transcription-direction:
 +
** positive
 +
* right-end-position:
 +
** 116824
 +
* left-end-position:
 +
** 80027
 +
* centisome-position:
 +
** 16.628712   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
+
* [[BETA-UREIDOPROPIONASE-RXN]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[BRANCHED-CHAINAMINOTRANSFERLEU-RXN]]
+
* [[N-CARBAMOYLPUTRESCINE-AMIDASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]]
+
* [[RXN-11210]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-3982]]
−
* [[ILEUSYN-PWY]]
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
* [[PWY-43]]
−
* [[ILEUDEG-PWY]]
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
* [[ARGDEG-III-PWY]]
−
* [[PWY-5078]]
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-6430]]
−
* [[PWY-5103]]
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
−
* [[PWY-5104]]
+
{{#set: right-end-position=116824}}
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
{{#set: left-end-position=80027}}
−
* [[PWY-5101]]
+
{{#set: centisome-position=16.628712    }}
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5108]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[LEU-DEG2-PWY]]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5076]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7767]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[LEUSYN-PWY]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[VALSYN-PWY]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[ALANINE-VALINESYN-PWY]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5057]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[VALDEG-PWY]]
 
−
** '''6''' reactions found over '''8''' reactions in the full pathway
 
−
</div>
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=3}}
 
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=15}}
+
{{#set: nb pathway associated=4}}

Revision as of 18:51, 14 January 2021

Gene SJ06121

  • transcription-direction:
    • positive
  • right-end-position:
    • 116824
  • left-end-position:
    • 80027
  • centisome-position:
    • 16.628712

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-3982
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-43
    • 3 reactions found over 3 reactions in the full pathway
  • ARGDEG-III-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6430
    • 1 reactions found over 3 reactions in the full pathway




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