Difference between revisions of "SJ17429"

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(Created page with "Category:gene == Gene SJ18555 == * transcription-direction: ** positive * right-end-position: ** 131638 * left-end-position: ** 110883 * centisome-position: ** 45.866615...")
(Created page with "Category:gene == Gene SJ17429 == * transcription-direction: ** negative * right-end-position: ** 174592 * left-end-position: ** 170486 * centisome-position: ** 25.208225...")
 
(6 intermediate revisions by 3 users not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ18555 ==
+
== Gene SJ17429 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 131638
+
** 174592
 
* left-end-position:
 
* left-end-position:
−
** 110883
+
** 170486
 
* centisome-position:
 
* centisome-position:
−
** 45.866615    
+
** 25.208225    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[TYROSINE--TRNA-LIGASE-RXN]]
+
* [[ATPASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[TRNA-CHARGING-PWY]]
+
* [[PWY-6545]]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-7210]]
−
{{#set: right-end-position=131638}}
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
{{#set: left-end-position=110883}}
+
* [[PWY-7198]]
−
{{#set: centisome-position=45.866615   }}
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
* [[PWY-7184]]
−
{{#set: nb reaction associated=1}}
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
{{#set: nb pathway associated=1}}
+
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=174592}}
 +
{{#set: left-end-position=170486}}
 +
{{#set: centisome-position=25.208225   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=4}}

Latest revision as of 11:02, 18 March 2021

Gene SJ17429

  • transcription-direction:
    • negative
  • right-end-position:
    • 174592
  • left-end-position:
    • 170486
  • centisome-position:
    • 25.208225

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17429&oldid=132714"