Difference between revisions of "SJ17464"

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(Created page with "Category:gene == Gene SJ04586 == * transcription-direction: ** positive * right-end-position: ** 36804 * left-end-position: ** 17554 * centisome-position: ** 16.736586...")
(Created page with "Category:gene == Gene SJ16651 == * transcription-direction: ** positive * right-end-position: ** 48549 * left-end-position: ** 37758 * centisome-position: ** 13.570836...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04586 ==
+
== Gene SJ16651 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 36804
+
** 48549
 
* left-end-position:
 
* left-end-position:
−
** 17554
+
** 37758
 
* centisome-position:
 
* centisome-position:
−
** 16.736586    
+
** 13.570836    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
+
* [[3.1.3.16-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[BRANCHED-CHAINAMINOTRANSFERLEU-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
== Pathway(s) associated ==
 
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* [[ILEUSYN-PWY]]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[ILEUDEG-PWY]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5078]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5103]]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5104]]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5101]]
 
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5108]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[LEU-DEG2-PWY]]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5076]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7767]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[LEUSYN-PWY]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[VALSYN-PWY]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[ALANINE-VALINESYN-PWY]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5057]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[VALDEG-PWY]]
 
−
** '''6''' reactions found over '''8''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=36804}}
+
{{#set: right-end-position=48549}}
−
{{#set: left-end-position=17554}}
+
{{#set: left-end-position=37758}}
−
{{#set: centisome-position=16.736586   }}
+
{{#set: centisome-position=13.570836   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=3}}
 
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=15}}
 

Revision as of 12:58, 14 January 2021

Gene SJ16651

  • transcription-direction:
    • positive
  • right-end-position:
    • 48549
  • left-end-position:
    • 37758
  • centisome-position:
    • 13.570836

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17464&oldid=80172"