Difference between revisions of "SJ17482"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-11592 CPD-11592] == * smiles: ** cc(c)=ccnc3(c2(n=cn(c1(oc(cop(=o)([o-])o[a trna])c(op([o-]...")
(Created page with "Category:gene == Gene SJ07846 == * transcription-direction: ** negative * right-end-position: ** 40060 * left-end-position: ** 15932 * centisome-position: ** 26.045021...")
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[[Category:metabolite]]
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[[Category:gene]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-11592 CPD-11592] ==
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== Gene SJ07846 ==
* smiles:
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* transcription-direction:
** cc(c)=ccnc3(c2(n=cn(c1(oc(cop(=o)([o-])o[a trna])c(op([o-])(=o)o[a trna])c(o)1))c=2n=c(sc)n=3))
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** negative
* common-name:
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* right-end-position:
** 2-methylsulfanyl-n6-dimethylallyladenosine37 in trna
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** 40060
== Reaction(s) known to consume the compound ==
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* left-end-position:
== Reaction(s) known to produce the compound ==
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** 15932
* [[RXN-14481]]
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* centisome-position:
* [[RXN0-5063]]
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** 26.045021   
== Reaction(s) of unknown directionality ==
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== Organism(s) associated with this gene  ==
{{#set: common-name=2-methylsulfanyl-n6-dimethylallyladenosine37 in trna}}
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* [[S.japonica_sterols_curated]]
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== Reaction(s) associated ==
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* [[ATPASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12195]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=40060}}
 +
{{#set: left-end-position=15932}}
 +
{{#set: centisome-position=26.045021    }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=4}}

Revision as of 20:21, 18 December 2020

Gene SJ07846

  • transcription-direction:
    • negative
  • right-end-position:
    • 40060
  • left-end-position:
    • 15932
  • centisome-position:
    • 26.045021

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway