Difference between revisions of "SJ17484"

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(Created page with "Category:gene == Gene SJ21024 == * transcription-direction: ** negative * right-end-position: ** 151499 * left-end-position: ** 139782 * centisome-position: ** 69.468285...")
(Created page with "Category:gene == Gene SJ17484 == * transcription-direction: ** negative * right-end-position: ** 53187 * left-end-position: ** 44448 * centisome-position: ** 16.981218...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21024 ==
+
== Gene SJ17484 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 151499
+
** 53187
 
* left-end-position:
 
* left-end-position:
−
** 139782
+
** 44448
 
* centisome-position:
 
* centisome-position:
−
** 69.468285    
+
** 16.981218    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3PGAREARR-RXN]]
+
* [[FUMARATE-REDUCTASE-NADH-RXN]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14971]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-15378]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[PWY-6142]]
+
* [[PWY-6969]]
−
** '''10''' reactions found over '''13''' reactions in the full pathway
+
** '''10''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7003]]
+
* [[PWY-5690]]
−
** '''8''' reactions found over '''6''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7218]]
+
* [[P105-PWY]]
−
** '''7''' reactions found over '''4''' reactions in the full pathway
+
** '''10''' reactions found over '''9''' reactions in the full pathway
−
* [[GLYCOLYSIS]]
+
* [[TCA]]
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
** '''9''' reactions found over '''10''' reactions in the full pathway
−
* [[P341-PWY]]
+
* [[PWY-7254]]
−
** '''6''' reactions found over '''10''' reactions in the full pathway
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5723]]
+
* [[PWY-561]]
 +
** '''6''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6728]]
 +
** '''11''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-3781]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7279]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY0-1353]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY66-398]]
 
** '''10''' reactions found over '''10''' reactions in the full pathway
 
** '''10''' reactions found over '''10''' reactions in the full pathway
−
* [[P124-PWY]]
+
* [[PWY-4302]]
−
** '''12''' reactions found over '''15''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-2221]]
+
* [[PWY0-1329]]
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5484]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-1042]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6886]]
 
−
** '''8''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6901]]
 
−
** '''10''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7124]]
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
−
* [[GLUCONEO-PWY]]
 
−
** '''12''' reactions found over '''13''' reactions in the full pathway
 
 
</div>
 
</div>
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=151499}}
+
{{#set: right-end-position=53187}}
−
{{#set: left-end-position=139782}}
+
{{#set: left-end-position=44448}}
−
{{#set: centisome-position=69.468285   }}
+
{{#set: centisome-position=16.981218   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=14}}
+
{{#set: nb pathway associated=13}}

Latest revision as of 11:10, 18 March 2021

Gene SJ17484

  • transcription-direction:
    • negative
  • right-end-position:
    • 53187
  • left-end-position:
    • 44448
  • centisome-position:
    • 16.981218

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6969
    • 10 reactions found over 9 reactions in the full pathway
  • PWY-5690
    • 8 reactions found over 9 reactions in the full pathway
  • P105-PWY
    • 10 reactions found over 9 reactions in the full pathway
  • TCA
    • 9 reactions found over 10 reactions in the full pathway
  • PWY-7254
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-561
    • 6 reactions found over 4 reactions in the full pathway
  • PWY-6728
    • 11 reactions found over 19 reactions in the full pathway
  • PWY-3781
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7279
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1353
    • 1 reactions found over 2 reactions in the full pathway
  • PWY66-398
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-4302
    • 3 reactions found over 3 reactions in the full pathway
  • PWY0-1329
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17484&oldid=136287"