Difference between revisions of "SJ17484"

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(Created page with "Category:gene == Gene SJ21024 == * transcription-direction: ** negative * right-end-position: ** 151499 * left-end-position: ** 139782 * centisome-position: ** 69.468285...")
(Created page with "Category:gene == Gene SJ20124 == * transcription-direction: ** positive * right-end-position: ** 113500 * left-end-position: ** 103242 * centisome-position: ** 48.47543...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21024 ==
+
== Gene SJ20124 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 151499
+
** 113500
 
* left-end-position:
 
* left-end-position:
−
** 139782
+
** 103242
 
* centisome-position:
 
* centisome-position:
−
** 69.468285    
+
** 48.47543    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3PGAREARR-RXN]]
+
* [[RXN-15556]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* [[RXN-15563]]
−
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15564]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15565]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7511]]
−
* [[PWY-6142]]
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
** '''10''' reactions found over '''13''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
−
* [[PWY-7003]]
+
{{#set: right-end-position=113500}}
−
** '''8''' reactions found over '''6''' reactions in the full pathway
+
{{#set: left-end-position=103242}}
−
* [[PWY-7218]]
+
{{#set: centisome-position=48.47543   }}
−
** '''7''' reactions found over '''4''' reactions in the full pathway
+
{{#set: organism associated=S.japonica_sterols_curated}}
−
* [[GLYCOLYSIS]]
+
{{#set: nb reaction associated=5}}
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
{{#set: nb pathway associated=1}}
−
* [[P341-PWY]]
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-5723]]
 
−
** '''10''' reactions found over '''10''' reactions in the full pathway
 
−
* [[P124-PWY]]
 
−
** '''12''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-2221]]
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5484]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-1042]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6886]]
 
−
** '''8''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6901]]
 
−
** '''10''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7124]]
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
−
* [[GLUCONEO-PWY]]
 
−
** '''12''' reactions found over '''13''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=151499}}
 
−
{{#set: left-end-position=139782}}
 
−
{{#set: centisome-position=69.468285   }}
 
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
−
{{#set: nb reaction associated=2}}
 
−
{{#set: nb pathway associated=14}}
 

Revision as of 20:29, 18 December 2020

Gene SJ20124

  • transcription-direction:
    • positive
  • right-end-position:
    • 113500
  • left-end-position:
    • 103242
  • centisome-position:
    • 48.47543

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7511
    • 7 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17484&oldid=45103"