Difference between revisions of "SJ17488"
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(Created page with "Category:gene == Gene SJ01763 == * transcription-direction: ** negative * right-end-position: ** 18767 * left-end-position: ** 8866 * centisome-position: ** 6.071854 =...") |
(Created page with "Category:gene == Gene SJ17488 == * transcription-direction: ** positive * right-end-position: ** 253488 * left-end-position: ** 244658 * centisome-position: ** 93.58201...") |
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[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ17488 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 253488 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 244658 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 93.58201 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[L-IDITOL-2-DEHYDROGENASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | + | ** Category: [[orthology]] | |
| − | ** Category: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | *** source: [[ | + | * [[RXN-1102]] |
| − | * [[RXN- | + | ** Category: [[orthology]] |
| − | ** Category: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | *** source: [[ | + | * [[RXN-1125]] |
| − | * [[RXN- | + | ** Category: [[orthology]] |
| − | ** Category: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | *** source: [[ | + | * [[RXN-7644]] |
| − | * [[RXN- | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[SBTD_D2]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-361]] |
| − | ** ''' | + | ** '''7''' reactions found over '''15''' reactions in the full pathway |
| − | + | * [[PWY-4101]] | |
| − | + | ** '''2''' reactions found over '''3''' reactions in the full pathway | |
| − | + | {{#set: transcription-direction=positive}} | |
| − | + | {{#set: right-end-position=253488}} | |
| − | * [[PWY- | + | {{#set: left-end-position=244658}} |
| − | ** '''2''' reactions found over ''' | + | {{#set: centisome-position=93.58201 }} |
| − | |||
| − | |||
| − | |||
| − | |||
| − | {{#set: transcription-direction= | ||
| − | {{#set: right-end-position= | ||
| − | {{#set: left-end-position= | ||
| − | {{#set: centisome-position= | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
{{#set: nb reaction associated=5}} | {{#set: nb reaction associated=5}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=2}} |
Latest revision as of 11:04, 18 March 2021
Contents
Gene SJ17488
- transcription-direction:
- positive
- right-end-position:
- 253488
- left-end-position:
- 244658
- centisome-position:
- 93.58201
Organism(s) associated with this gene
Reaction(s) associated
- L-IDITOL-2-DEHYDROGENASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-1102
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-1125
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-7644
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- SBTD_D2
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-361
- 7 reactions found over 15 reactions in the full pathway
- PWY-4101
- 2 reactions found over 3 reactions in the full pathway
