Difference between revisions of "SJ17501"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PROPIONYL-COA PROPIONYL-COA] == * common-name: ** propanoyl-coa * smiles: ** ccc(=o)sccnc(=o)cc...")
(Created page with "Category:gene == Gene SJ19268 == * transcription-direction: ** negative * right-end-position: ** 472452 * left-end-position: ** 458002 * centisome-position: ** 72.21387...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PROPIONYL-COA PROPIONYL-COA] ==
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== Gene SJ19268 ==
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* common-name:
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* transcription-direction:
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** propanoyl-coa
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** negative
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* smiles:
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* right-end-position:
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** ccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
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** 472452
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* inchi-key:
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* left-end-position:
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** qaqrevbbadehpa-iexphmlfsa-j
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** 458002
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* molecular-weight:
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* centisome-position:
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** 819.566
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** 72.21387   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[METHYLACETOACETYLCOATHIOL-RXN]]
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* [[S.japonica_sterols_curated]]
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* [[METHYLMALONYL-COA-DECARBOXYLASE-RXN]]
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== Reaction(s) associated ==
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* [[PPCOAOm]]
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* [[2.7.7.15-RXN]]
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* [[PROPIONYL-COA-CARBOXY-RXN]]
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** Category: [[annotation]]
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== Reaction(s) known to produce the compound ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[1.2.1.27-RXN]]
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** Category: [[orthology]]
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* [[2.3.1.176-RXN]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[ACCAT]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* [[METHYLACETOACETYLCOATHIOL-RXN]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[METHYLMALONYL-COA-DECARBOXYLASE-RXN]]
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* [[CHLPCTDh]]
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* [[PPCOAOm]]
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** Category: [[orthology]]
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* [[PROPIONYL-COA-CARBOXY-RXN]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-11213]]
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== Pathway(s) associated ==
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* [[RXN-12561]]
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* [[PWY-7886]]
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* [[RXN-7790]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reaction(s) of unknown directionality ==
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* [[PWY3O-450]]
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{{#set: common-name=propanoyl-coa}}
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** '''3''' reactions found over '''3''' reactions in the full pathway
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{{#set: inchi-key=inchikey=qaqrevbbadehpa-iexphmlfsa-j}}
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* [[PWY-3561]]
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{{#set: molecular-weight=819.566}}
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7818]]
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** '''2''' reactions found over '''19''' reactions in the full pathway
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* [[PWY4FS-2]]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7782]]
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** '''11''' reactions found over '''16''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=472452}}
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{{#set: left-end-position=458002}}
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{{#set: centisome-position=72.21387    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=2}}
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{{#set: nb pathway associated=6}}

Revision as of 20:22, 18 December 2020

Gene SJ19268

  • transcription-direction:
    • negative
  • right-end-position:
    • 472452
  • left-end-position:
    • 458002
  • centisome-position:
    • 72.21387

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7886
    • 2 reactions found over 3 reactions in the full pathway
  • PWY3O-450
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-3561
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7818
    • 2 reactions found over 19 reactions in the full pathway
  • PWY4FS-2
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7782
    • 11 reactions found over 16 reactions in the full pathway




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