Difference between revisions of "SJ17529"

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(Created page with "Category:gene == Gene SJ14591 == * transcription-direction: ** negative * right-end-position: ** 77023 * left-end-position: ** 72230 * centisome-position: ** 23.181847...")
(Created page with "Category:gene == Gene SJ17529 == * transcription-direction: ** positive * right-end-position: ** 18260 * left-end-position: ** 15769 * centisome-position: ** 6.050595...")
 
(4 intermediate revisions by 2 users not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ14591 ==
+
== Gene SJ17529 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 77023
+
** 18260
 
* left-end-position:
 
* left-end-position:
−
** 72230
+
** 15769
 
* centisome-position:
 
* centisome-position:
−
** 23.181847    
+
** 6.050595    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[2PGADEHYDRAT-RXN]]
−
* [[3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[ENOYL-COA-HYDRAT-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[METHYLACYLYLCOA-HYDROXY-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[METHYLMALONYL-COA-DECARBOXYLASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10697]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10704]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10705]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-11244]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12567]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-13029]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-13616]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-13721]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-14266]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-14272]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-14273]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16135]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16558]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17114]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17475]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17776]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17780]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17785]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17789]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-2425]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-6384]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-902]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5393]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[TIGLYLCOA-HYDROXY-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[VALDEG-PWY]]
+
* [[GLUCONEO-PWY]]
−
** '''6''' reactions found over '''8''' reactions in the full pathway
+
** '''12''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-5138]]
+
* [[P124-PWY]]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''12''' reactions found over '''15''' reactions in the full pathway
−
* [[PWY-5136]]
+
* [[PWY-2221]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''6''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY66-391]]
+
* [[NPGLUCAT-PWY]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''4''' reactions found over '''9''' reactions in the full pathway
−
* [[FAO-PWY]]
+
* [[PWY-1622]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''6''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-7007]]
+
* [[P122-PWY]]
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''16''' reactions found over '''18''' reactions in the full pathway
−
* [[PWY-735]]
+
* [[PWY-5484]]
−
** '''16''' reactions found over '''19''' reactions in the full pathway
+
** '''10''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-7046]]
+
* [[P341-PWY]]
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
** '''6''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-6435]]
+
* [[GLYCOLYSIS]]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''11''' reactions found over '''12''' reactions in the full pathway
−
* [[PWY-6863]]
+
* [[ANAGLYCOLYSIS-PWY]]
−
** '''9''' reactions found over '''11''' reactions in the full pathway
+
** '''10''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-7094]]
+
* [[PWY66-399]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''11''' reactions found over '''12''' reactions in the full pathway
−
* [[PWY-7656]]
+
* [[PWY-1042]]
−
** '''4''' reactions found over '''22''' reactions in the full pathway
+
** '''9''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-7654]]
+
* [[PWY-6142]]
−
** '''5''' reactions found over '''11''' reactions in the full pathway
+
** '''10''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-7606]]
+
* [[PWY-7003]]
−
** '''8''' reactions found over '''14''' reactions in the full pathway
+
** '''8''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7726]]
+
* [[PWY-6886]]
−
** '''8''' reactions found over '''13''' reactions in the full pathway
+
** '''8''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY0-321]]
+
* [[PWY-6901]]
−
** '''2''' reactions found over '''9''' reactions in the full pathway
+
** '''10''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-1361]]
+
* [[PWY-7124]]
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-3941]]
+
* [[PWY-5723]]
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
** '''10''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-7574]]
+
* [[PWY-7218]]
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''7''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-81]]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY0-1337]]
 
−
** '''1''' reactions found over '''35''' reactions in the full pathway
 
−
* [[ILEUDEG-PWY]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5109]]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
 
</div>
 
</div>
−
{{#set: transcription-direction=negative}}
+
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=77023}}
+
{{#set: right-end-position=18260}}
−
{{#set: left-end-position=72230}}
+
{{#set: left-end-position=15769}}
−
{{#set: centisome-position=23.181847   }}
+
{{#set: centisome-position=6.050595   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=28}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=23}}
+
{{#set: nb pathway associated=19}}

Latest revision as of 11:05, 18 March 2021

Gene SJ17529

  • transcription-direction:
    • positive
  • right-end-position:
    • 18260
  • left-end-position:
    • 15769
  • centisome-position:
    • 6.050595

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • GLUCONEO-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • P124-PWY
    • 12 reactions found over 15 reactions in the full pathway
  • PWY-2221
    • 6 reactions found over 9 reactions in the full pathway
  • NPGLUCAT-PWY
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-1622
    • 6 reactions found over 13 reactions in the full pathway
  • P122-PWY
    • 16 reactions found over 18 reactions in the full pathway
  • PWY-5484
    • 10 reactions found over 11 reactions in the full pathway
  • P341-PWY
    • 6 reactions found over 10 reactions in the full pathway
  • GLYCOLYSIS
    • 11 reactions found over 12 reactions in the full pathway
  • ANAGLYCOLYSIS-PWY
    • 10 reactions found over 11 reactions in the full pathway
  • PWY66-399
    • 11 reactions found over 12 reactions in the full pathway
  • PWY-1042
    • 9 reactions found over 10 reactions in the full pathway
  • PWY-6142
    • 10 reactions found over 13 reactions in the full pathway
  • PWY-7003
    • 8 reactions found over 6 reactions in the full pathway
  • PWY-6886
    • 8 reactions found over 5 reactions in the full pathway
  • PWY-6901
    • 10 reactions found over 8 reactions in the full pathway
  • PWY-7124
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-5723
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-7218
    • 7 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17529&oldid=133865"