Difference between revisions of "SJ17534"
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(Created page with "Category:gene == Gene SJ20074 == * transcription-direction: ** negative * right-end-position: ** 59827 * left-end-position: ** 55698 * centisome-position: ** 15.581211...") |
(Created page with "Category:gene == Gene SJ19412 == * transcription-direction: ** negative * right-end-position: ** 119670 * left-end-position: ** 113189 * centisome-position: ** 17.853914...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ19412 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 119670 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 113189 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 17.853914 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
− | * [[S. | + | * [[S.japonica_carotenoid_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[NADH-DEHYDROG-A-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN | + | ** Category: [[orthology]] |
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[NADH-DEHYDROGENASE-QUINONE-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN | + | * [[NADH-DEHYDROGENASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | * [[RXN0-5330]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | ** '''3''' reactions found over '''5''' reactions in the full pathway | + | * [[PWY0-1335]] |
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-4302]] | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-3781]] | ||
+ | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY0-1334]] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-6692]] | ||
+ | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-5083]] | ||
+ | ** '''5''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-7279]] | ||
+ | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY0-1573]] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-7269]] | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY0-1568]] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY0-1567]] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | </div> | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=119670}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=113189}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=17.853914 }} |
− | {{#set: organism associated=S. | + | {{#set: organism associated=S.japonica_carotenoid_curated}} |
{{#set: nb reaction associated=4}} | {{#set: nb reaction associated=4}} | ||
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=11}} |
Revision as of 14:49, 5 January 2021
Contents
Gene SJ19412
- transcription-direction:
- negative
- right-end-position:
- 119670
- left-end-position:
- 113189
- centisome-position:
- 17.853914
Organism(s) associated with this gene
Reaction(s) associated
- NADH-DEHYDROG-A-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- NADH-DEHYDROGENASE-QUINONE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- NADH-DEHYDROGENASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-5330
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY0-1335
- 1 reactions found over 2 reactions in the full pathway
- PWY-4302
- 3 reactions found over 3 reactions in the full pathway
- PWY-3781
- 4 reactions found over 4 reactions in the full pathway
- PWY0-1334
- 1 reactions found over 2 reactions in the full pathway
- PWY-6692
- 3 reactions found over 6 reactions in the full pathway
- PWY-5083
- 5 reactions found over 6 reactions in the full pathway
- PWY-7279
- 4 reactions found over 4 reactions in the full pathway
- PWY0-1573
- 1 reactions found over 2 reactions in the full pathway
- PWY-7269
- 5 reactions found over 5 reactions in the full pathway
- PWY0-1568
- 1 reactions found over 2 reactions in the full pathway
- PWY0-1567
- 1 reactions found over 2 reactions in the full pathway