Difference between revisions of "SJ17565"

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(Created page with "Category:gene == Gene SJ17253 == * transcription-direction: ** positive * right-end-position: ** 128345 * left-end-position: ** 106230 * centisome-position: ** 15.683733...")
(Created page with "Category:gene == Gene SJ07670 == * transcription-direction: ** negative * right-end-position: ** 263667 * left-end-position: ** 253384 * centisome-position: ** 56.476612...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ17253 ==
+
== Gene SJ07670 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 128345
+
** 263667
 
* left-end-position:
 
* left-end-position:
−
** 106230
+
** 253384
 
* centisome-position:
 
* centisome-position:
−
** 15.683733    
+
** 56.476612    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[CYTOCHROME-C-PEROXIDASE-RXN]]
+
* [[RXN-10606]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PEROXID-RXN]]
+
* [[RXN-10607]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-10608]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12440]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14240]]
+
* [[RXN-10609]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-10616]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-15288]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-10617]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-17352]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-10618]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-3521]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-8635]]
+
* [[RXN-10619]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10784]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-11060]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13607]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13608]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14361]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9000]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-162]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-168]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-83]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[UDP-GLUCURONOSYLTRANSFERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-6261]]
−
* [[PWY-6959]]
+
** '''10''' reactions found over '''15''' reactions in the full pathway
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-6313]]
−
* [[PWY-6960]]
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
* [[PWY-6398]]
−
* [[PWY-6961]]
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5756]]
 
** '''1''' reactions found over '''8''' reactions in the full pathway
 
** '''1''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-7214]]
+
* [[PWY66-221]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''5''' reactions found over '''18''' reactions in the full pathway
−
* [[PWY-7445]]
+
* [[PWY66-201]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''16''' reactions in the full pathway
−
* [[PWY-5466]]
+
{{#set: transcription-direction=negative}}
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
{{#set: right-end-position=263667}}
−
* [[PWY-6824]]
+
{{#set: left-end-position=253384}}
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
{{#set: centisome-position=56.476612   }}
−
* [[PWY-5469]]
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
{{#set: nb reaction associated=18}}
−
* [[PWY-2261]]
+
{{#set: nb pathway associated=6}}
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5461]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=128345}}
 
−
{{#set: left-end-position=106230}}
 
−
{{#set: centisome-position=15.683733   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=8}}
 
−
{{#set: nb pathway associated=10}}
 

Revision as of 14:44, 5 January 2021

Gene SJ07670

  • transcription-direction:
    • negative
  • right-end-position:
    • 263667
  • left-end-position:
    • 253384
  • centisome-position:
    • 56.476612

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6261
    • 10 reactions found over 15 reactions in the full pathway
  • PWY-6313
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6398
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-5756
    • 1 reactions found over 8 reactions in the full pathway
  • PWY66-221
    • 5 reactions found over 18 reactions in the full pathway
  • PWY66-201
    • 3 reactions found over 16 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17565&oldid=53974"