Difference between revisions of "SJ17565"

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(Created page with "Category:gene == Gene SJ17253 == * transcription-direction: ** positive * right-end-position: ** 128345 * left-end-position: ** 106230 * centisome-position: ** 15.683733...")
(Created page with "Category:gene == Gene SJ12375 == * transcription-direction: ** negative * right-end-position: ** 323728 * left-end-position: ** 317807 * centisome-position: ** 88.42636...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ17253 ==
+
== Gene SJ12375 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 128345
+
** 323728
 
* left-end-position:
 
* left-end-position:
−
** 106230
+
** 317807
 
* centisome-position:
 
* centisome-position:
−
** 15.683733    
+
** 88.42636    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* [[CYTOCHROME-C-PEROXIDASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
* [[PEROXID-RXN]]
 
* [[PEROXID-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12440]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
Line 27: Line 18:
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* [[RXN-15288]]
 
* [[RXN-15288]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* [[RXN-17352]]
 
* [[RXN-17352]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-3521]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
Line 45: Line 27:
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* [[PWY-6959]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6960]]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6961]]
 
−
** '''1''' reactions found over '''8''' reactions in the full pathway
 
 
* [[PWY-7214]]
 
* [[PWY-7214]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-5469]]
 
* [[PWY-5469]]
 
** '''2''' reactions found over '''8''' reactions in the full pathway
 
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-2261]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
* [[PWY-5461]]
 
* [[PWY-5461]]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
−
</div>
+
{{#set: transcription-direction=negative}}
−
{{#set: transcription-direction=positive}}
+
{{#set: right-end-position=323728}}
−
{{#set: right-end-position=128345}}
+
{{#set: left-end-position=317807}}
−
{{#set: left-end-position=106230}}
+
{{#set: centisome-position=88.42636   }}
−
{{#set: centisome-position=15.683733   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=8}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=10}}
+
{{#set: nb pathway associated=6}}

Revision as of 18:43, 14 January 2021

Gene SJ12375

  • transcription-direction:
    • negative
  • right-end-position:
    • 323728
  • left-end-position:
    • 317807
  • centisome-position:
    • 88.42636

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17565&oldid=93060"