Difference between revisions of "SJ17677"

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(Created page with "Category:gene == Gene SJ05312 == * transcription-direction: ** positive * right-end-position: ** 21842 * left-end-position: ** 11567 * centisome-position: ** 12.282974...")
 
(Created page with "Category:gene == Gene SJ17677 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * BRANCHED-CHAINAMINOTRANS...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05312 ==
+
== Gene SJ17677 ==
−
* transcription-direction:
 
−
** positive
 
−
* right-end-position:
 
−
** 21842
 
−
* left-end-position:
 
−
** 11567
 
−
* centisome-position:
 
−
** 12.282974   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
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* [[ATPASE-RXN]]
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** Category: [[orthology]]
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** Category: [[annotation]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[BRANCHED-CHAINAMINOTRANSFERLEU-RXN]]
−
* [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]]
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* [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-11109]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12195]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5462]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6797]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[ILEUSYN-PWY]]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[ILEUDEG-PWY]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5078]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5103]]
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6147]]
+
* [[PWY-5104]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7539]]
+
* [[PWY-5101]]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''4''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-7210]]
+
* [[PWY-5108]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[LEU-DEG2-PWY]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY-5076]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY-7767]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[LEUSYN-PWY]]
−
{{#set: right-end-position=21842}}
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
{{#set: left-end-position=11567}}
+
* [[VALSYN-PWY]]
−
{{#set: centisome-position=12.282974    }}
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** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[ALANINE-VALINESYN-PWY]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5057]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[VALDEG-PWY]]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 +
</div>
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=8}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=15}}

Latest revision as of 11:10, 18 March 2021

Gene SJ17677

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • ILEUSYN-PWY
    • 4 reactions found over 7 reactions in the full pathway
  • ILEUDEG-PWY
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-5078
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5103
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-5104
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-5101
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-5108
    • 2 reactions found over 3 reactions in the full pathway
  • LEU-DEG2-PWY
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-5076
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7767
    • 1 reactions found over 5 reactions in the full pathway
  • LEUSYN-PWY
    • 5 reactions found over 6 reactions in the full pathway
  • VALSYN-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • ALANINE-VALINESYN-PWY
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5057
    • 2 reactions found over 3 reactions in the full pathway
  • VALDEG-PWY
    • 6 reactions found over 8 reactions in the full pathway


Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17677&oldid=136377"