Difference between revisions of "SJ17695"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-464 CPD-464] == * common-name: ** prephytoene diphosphate * smiles: ** cc(=cccc(=cccc(=cccc...")
(Created page with "Category:gene == Gene SJ15444 == * transcription-direction: ** negative * right-end-position: ** 285189 * left-end-position: ** 273359 * centisome-position: ** 92.48161...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-464 CPD-464] ==
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== Gene SJ15444 ==
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* common-name:
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* transcription-direction:
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** prephytoene diphosphate
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** negative
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* smiles:
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* right-end-position:
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** cc(=cccc(=cccc(=cccc(=cc1(c(ccc=c(ccc=c(ccc=c(c)c)c)c)(c1cop(op(=o)([o-])[o-])([o-])=o)c))c)c)c)c
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** 285189
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* inchi-key:
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* left-end-position:
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** rvcnktpchznaao-imslgmfesa-k
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** 273359
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* molecular-weight:
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* centisome-position:
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** 719.897
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** 92.48161   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXNARA-8002]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[2.5.1.32-RXN]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) of unknown directionality ==
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* [[325-BISPHOSPHATE-NUCLEOTIDASE-RXN]]
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{{#set: common-name=prephytoene diphosphate}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=rvcnktpchznaao-imslgmfesa-k}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=719.897}}
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[4-NITROPHENYLPHOSPHATASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[R163-RXN]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-10949]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10952]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10953]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10954]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-7253]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN0-5408]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PWY-2301]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6363]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-4702]]
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** '''3''' reactions found over '''14''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=285189}}
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{{#set: left-end-position=273359}}
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{{#set: centisome-position=92.48161    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=10}}
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{{#set: nb pathway associated=3}}

Revision as of 09:25, 27 August 2019

Gene SJ15444

  • transcription-direction:
    • negative
  • right-end-position:
    • 285189
  • left-end-position:
    • 273359
  • centisome-position:
    • 92.48161

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-2301
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6363
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-4702
    • 3 reactions found over 14 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17695&oldid=29162"