Difference between revisions of "SJ17818"

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(Created page with "Category:gene == Gene SJ04418 == * transcription-direction: ** negative * right-end-position: ** 96925 * left-end-position: ** 89463 * centisome-position: ** 83.344666...")
(Created page with "Category:gene == Gene SJ11408 == * transcription-direction: ** positive * right-end-position: ** 125399 * left-end-position: ** 121622 * centisome-position: ** 32.66195...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04418 ==
+
== Gene SJ11408 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 96925
+
** 125399
 
* left-end-position:
 
* left-end-position:
−
** 89463
+
** 121622
 
* centisome-position:
 
* centisome-position:
−
** 83.344666    
+
** 32.66195    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN]]
+
* [[3.1.2.21-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[NAPHTHOATE-SYN-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[NPHS]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-13721]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-6384]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[VALDEG-PWY]]
+
* [[PWY-5971]]
−
** '''6''' reactions found over '''8''' reactions in the full pathway
+
** '''31''' reactions found over '''31''' reactions in the full pathway
−
* [[PWY-5837]]
+
* [[PWY-5994]]
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** '''31''' reactions found over '''31''' reactions in the full pathway
−
* [[PWY-3941]]
+
{{#set: transcription-direction=positive}}
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
{{#set: right-end-position=125399}}
−
* [[PWY-7574]]
+
{{#set: left-end-position=121622}}
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
{{#set: centisome-position=32.66195   }}
−
{{#set: transcription-direction=negative}}
+
{{#set: organism associated=S.japonica_sterols_curated}}
−
{{#set: right-end-position=96925}}
+
{{#set: nb reaction associated=1}}
−
{{#set: left-end-position=89463}}
+
{{#set: nb pathway associated=2}}
−
{{#set: centisome-position=83.344666   }}
 
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
−
{{#set: nb reaction associated=5}}
 
−
{{#set: nb pathway associated=4}}
 

Revision as of 20:25, 18 December 2020

Gene SJ11408

  • transcription-direction:
    • positive
  • right-end-position:
    • 125399
  • left-end-position:
    • 121622
  • centisome-position:
    • 32.66195

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5971
    • 31 reactions found over 31 reactions in the full pathway
  • PWY-5994
    • 31 reactions found over 31 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17818&oldid=43425"