Difference between revisions of "SJ17906"

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(Created page with "Category:gene == Gene SJ18981 == * transcription-direction: ** positive * right-end-position: ** 212420 * left-end-position: ** 210462 * centisome-position: ** 90.223656...")
(Created page with "Category:gene == Gene SJ15949 == * transcription-direction: ** negative * right-end-position: ** 79869 * left-end-position: ** 64576 * centisome-position: ** 22.334513...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ18981 ==
+
== Gene SJ15949 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 212420
+
** 79869
 
* left-end-position:
 
* left-end-position:
−
** 210462
+
** 64576
 
* centisome-position:
 
* centisome-position:
−
** 90.223656    
+
** 22.334513    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ATPASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[ASPCARBTRANS-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[CARBPSYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12195]]
+
* [[DIHYDROOROT-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12196]]
+
* [[GLUTAMIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-5462]]
+
* [[RXN-13202]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16909]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16910]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
* [[PWY-5686]]
−
* [[PWY-7198]]
+
** '''6''' reactions found over '''6''' reactions in the full pathway
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
* [[PWY-7790]]
−
* [[PWY-7184]]
+
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7791]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7400]]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[ARGSYN-PWY]]
 +
** '''5''' reactions found over '''4''' reactions in the full pathway
 +
* [[ARGSYNBSUB-PWY]]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY-5154]]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
** '''8''' reactions found over '''9''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[CITRULBIO-PWY]]
−
{{#set: right-end-position=212420}}
+
** '''7''' reactions found over '''8''' reactions in the full pathway
−
{{#set: left-end-position=210462}}
+
* [[GLUTAMINDEG-PWY]]
−
{{#set: centisome-position=90.223656   }}
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-4984]]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7693]]
 +
** '''3''' reactions found over '''13''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=79869}}
 +
{{#set: left-end-position=64576}}
 +
{{#set: centisome-position=22.334513   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=8}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=11}}

Revision as of 11:04, 15 January 2021

Gene SJ15949

  • transcription-direction:
    • negative
  • right-end-position:
    • 79869
  • left-end-position:
    • 64576
  • centisome-position:
    • 22.334513

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5686
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-7790
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-7791
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-7400
    • 7 reactions found over 9 reactions in the full pathway
  • ARGSYN-PWY
    • 5 reactions found over 4 reactions in the full pathway
  • ARGSYNBSUB-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-5154
    • 8 reactions found over 9 reactions in the full pathway
  • CITRULBIO-PWY
    • 7 reactions found over 8 reactions in the full pathway
  • GLUTAMINDEG-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-4984
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7693
    • 3 reactions found over 13 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17906&oldid=106697"