Difference between revisions of "SJ17906"

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(Created page with "Category:gene == Gene SJ15131 == * transcription-direction: ** negative * right-end-position: ** 60119 * left-end-position: ** 56442 * centisome-position: ** 18.751432...")
(Created page with "Category:gene == Gene SJ13240 == * transcription-direction: ** positive * right-end-position: ** 669408 * left-end-position: ** 661393 * centisome-position: ** 89.4692...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ15131 ==
+
== Gene SJ13240 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 60119
+
** 669408
 
* left-end-position:
 
* left-end-position:
−
** 56442
+
** 661393
 
* centisome-position:
 
* centisome-position:
−
** 18.751432    
+
** 89.4692    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[CARBODEHYDRAT-RXN]]
−
* [[3.6.4.5-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[ATPASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12195]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12196]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN0-5462]]
+
* [[RXN0-5224]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
* [[PWY-6142]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''10''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[PWYQT-4429]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[CYANCAT-PWY]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY-5744]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''4''' reactions found over '''13''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-5789]]
−
{{#set: right-end-position=60119}}
+
** '''8''' reactions found over '''18''' reactions in the full pathway
−
{{#set: left-end-position=56442}}
+
* [[PWY-5743]]
−
{{#set: centisome-position=18.751432   }}
+
** '''5''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-241]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7115]]
 +
** '''9''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7117]]
 +
** '''10''' reactions found over '''12''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=669408}}
 +
{{#set: left-end-position=661393}}
 +
{{#set: centisome-position=89.4692   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=9}}

Revision as of 12:59, 14 January 2021

Gene SJ13240

  • transcription-direction:
    • positive
  • right-end-position:
    • 669408
  • left-end-position:
    • 661393
  • centisome-position:
    • 89.4692

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6142
    • 10 reactions found over 13 reactions in the full pathway
  • PWYQT-4429
    • 2 reactions found over 2 reactions in the full pathway
  • CYANCAT-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5744
    • 4 reactions found over 13 reactions in the full pathway
  • PWY-5789
    • 8 reactions found over 18 reactions in the full pathway
  • PWY-5743
    • 5 reactions found over 13 reactions in the full pathway
  • PWY-241
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-7115
    • 9 reactions found over 10 reactions in the full pathway
  • PWY-7117
    • 10 reactions found over 12 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17906&oldid=80640"