Difference between revisions of "SJ17954"

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(Created page with "Category:gene == Gene SJ04753 == * transcription-direction: ** negative * right-end-position: ** 74762 * left-end-position: ** 65260 * centisome-position: ** 64.27213...")
(Created page with "Category:gene == Gene SJ05668 == * transcription-direction: ** negative * right-end-position: ** 53337 * left-end-position: ** 42551 * centisome-position: ** 8.6312275...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04753 ==
+
== Gene SJ05668 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 74762
+
** 53337
 
* left-end-position:
 
* left-end-position:
−
** 65260
+
** 42551
 
* centisome-position:
 
* centisome-position:
−
** 64.27213    
+
** 8.6312275    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
+
* [[RXN-11519]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-11520]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-11521]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-12615]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[ACID-PHOSPHATASE-RXN]]
+
* [[RXN-7682]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[NUCLEOTIDASE-RXN]]
+
* [[RXN0-901]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14473]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[XANTHINE-OXIDASE-RXN]]
−
* [[RXN-17947]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17948]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-5822]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-7241]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[SUGAR-PHOSPHATASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6348]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
* [[PWY-6632]]
−
* [[NAD-BIOSYNTHESIS-II]]
 
 
** '''4''' reactions found over '''3''' reactions in the full pathway
 
** '''4''' reactions found over '''3''' reactions in the full pathway
−
* [[NADPHOS-DEPHOS-PWY]]
+
* [[P164-PWY]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''6''' reactions found over '''17''' reactions in the full pathway
−
* [[PWY-5083]]
+
* [[PWY-6596]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''7''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-4702]]
+
* [[SALVADEHYPOX-PWY]]
−
** '''3''' reactions found over '''14''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5497]]
 +
** '''10''' reactions found over '''24''' reactions in the full pathway
 +
* [[PWY-6606]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6607]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6999]]
 +
** '''2''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6608]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6538]]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5695]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
</div>
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=74762}}
+
{{#set: right-end-position=53337}}
−
{{#set: left-end-position=65260}}
+
{{#set: left-end-position=42551}}
−
{{#set: centisome-position=64.27213   }}
+
{{#set: centisome-position=8.6312275   }}
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=9}}
+
{{#set: nb reaction associated=7}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=11}}

Revision as of 14:49, 5 January 2021

Gene SJ05668

  • transcription-direction:
    • negative
  • right-end-position:
    • 53337
  • left-end-position:
    • 42551
  • centisome-position:
    • 8.6312275

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6632
    • 4 reactions found over 3 reactions in the full pathway
  • P164-PWY
    • 6 reactions found over 17 reactions in the full pathway
  • PWY-6596
    • 7 reactions found over 8 reactions in the full pathway
  • SALVADEHYPOX-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-5497
    • 10 reactions found over 24 reactions in the full pathway
  • PWY-6606
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6607
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6999
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-6608
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6538
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-5695
    • 4 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17954&oldid=56679"