Difference between revisions of "SJ17991"

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(Created page with "Category:gene == Gene SJ01689 == * transcription-direction: ** negative * right-end-position: ** 35512 * left-end-position: ** 28486 * centisome-position: ** 19.430178...")
(Created page with "Category:gene == Gene SJ17991 == * transcription-direction: ** positive * right-end-position: ** 218554 * left-end-position: ** 206788 * centisome-position: ** 31.50196...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ01689 ==
+
== Gene SJ17991 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 35512
+
** 218554
 
* left-end-position:
 
* left-end-position:
** 28486
+
** 206788
 
* centisome-position:
 
* centisome-position:
** 19.430178    
+
** 31.50196    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[AKBLIG-RXN]]
+
* [[INORGPYROPHOSPHAT-RXN]]
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* [[SERINE-C-PALMITOYLTRANSFERASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[THREONINE-DEG2-PWY]]
+
* [[PWY-7805]]
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
* [[PWY3DJ-12]]
+
* [[PWY-7807]]
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''7''' reactions in the full pathway
* [[SPHINGOLIPID-SYN-PWY]]
+
{{#set: transcription-direction=positive}}
** '''4''' reactions found over '''11''' reactions in the full pathway
+
{{#set: right-end-position=218554}}
* [[PWY-5129]]
+
{{#set: left-end-position=206788}}
** '''4''' reactions found over '''13''' reactions in the full pathway
+
{{#set: centisome-position=31.50196   }}
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=35512}}
 
{{#set: left-end-position=28486}}
 
{{#set: centisome-position=19.430178   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=2}}

Latest revision as of 11:01, 18 March 2021

Gene SJ17991

  • transcription-direction:
    • positive
  • right-end-position:
    • 218554
  • left-end-position:
    • 206788
  • centisome-position:
    • 31.50196

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7805
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-7807
    • 2 reactions found over 7 reactions in the full pathway