Difference between revisions of "SJ17998"
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(Created page with "Category:gene == Gene SJ08366 == * transcription-direction: ** negative * right-end-position: ** 53537 * left-end-position: ** 30863 * centisome-position: ** 56.80969...") |
(Created page with "Category:gene == Gene SJ07444 == * transcription-direction: ** positive * right-end-position: ** 18463 * left-end-position: ** 5559 * centisome-position: ** 8.322977 =...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ07444 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 18463 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 5559 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 8.322977 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
| − | * [[ | + | * [[HISTALDEHYD-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | * [[HISTCYCLOHYD-RXN]] |
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | * [[ | + | * [[HISTOLDEHYD-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[RXN | + | * [[HISTPRATPHYD-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | + | ** Category: [[orthology]] | |
| − | ** Category: [[ | + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
| − | *** source: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | + | * [[RXN-8001]] | |
| − | |||
| − | *** source: [[ | ||
| − | * [[RXN- | ||
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
</div> | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[ | + | * [[HISTSYN-PWY]] |
| − | + | ** '''10''' reactions found over '''10''' reactions in the full pathway | |
| − | + | {{#set: transcription-direction=positive}} | |
| − | + | {{#set: right-end-position=18463}} | |
| − | + | {{#set: left-end-position=5559}} | |
| − | ** ''' | + | {{#set: centisome-position=8.322977 }} |
| − | {{#set: transcription-direction= | ||
| − | {{#set: right-end-position= | ||
| − | {{#set: left-end-position= | ||
| − | {{#set: centisome-position= | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=5}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
Revision as of 08:23, 15 March 2021
Contents
Gene SJ07444
- transcription-direction:
- positive
- right-end-position:
- 18463
- left-end-position:
- 5559
- centisome-position:
- 8.322977
Organism(s) associated with this gene
Reaction(s) associated
- HISTALDEHYD-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- HISTCYCLOHYD-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- HISTOLDEHYD-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- HISTPRATPHYD-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-8001
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- HISTSYN-PWY
- 10 reactions found over 10 reactions in the full pathway
