Difference between revisions of "SJ18059"

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(Created page with "Category:gene == Gene SJ20681 == * transcription-direction: ** positive * right-end-position: ** 162930 * left-end-position: ** 94853 * centisome-position: ** 46.316753...")
(Created page with "Category:gene == Gene SJ10400 == * transcription-direction: ** negative * right-end-position: ** 8152 * left-end-position: ** 1899 * centisome-position: ** 6.221538 ==...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ20681 ==
+
== Gene SJ10400 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 162930
+
** 8152
 
* left-end-position:
 
* left-end-position:
−
** 94853
+
** 1899
 
* centisome-position:
 
* centisome-position:
−
** 46.316753    
+
** 6.221538    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-15559]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[1.1.1.145-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-15560]]
+
* [[RXN-12693]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
+
* [[RXN-12747]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12789]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-342]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-350]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-353]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[UDP-GLUCURONATE-4-EPIMERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7511]]
+
* [[PWY-6946]]
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''6''' reactions found over '''22''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-6944]]
−
{{#set: right-end-position=162930}}
+
** '''2''' reactions found over '''25''' reactions in the full pathway
−
{{#set: left-end-position=94853}}
+
* [[PWY-6948]]
−
{{#set: centisome-position=46.316753   }}
+
** '''2''' reactions found over '''18''' reactions in the full pathway
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
* [[PWY66-378]]
−
{{#set: nb reaction associated=3}}
+
** '''3''' reactions found over '''6''' reactions in the full pathway
−
{{#set: nb pathway associated=1}}
+
* [[PWY-7299]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-4861]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-6415]]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=8152}}
 +
{{#set: left-end-position=1899}}
 +
{{#set: centisome-position=6.221538   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=8}}
 +
{{#set: nb pathway associated=7}}

Revision as of 14:51, 5 January 2021

Gene SJ10400

  • transcription-direction:
    • negative
  • right-end-position:
    • 8152
  • left-end-position:
    • 1899
  • centisome-position:
    • 6.221538

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6946
    • 6 reactions found over 22 reactions in the full pathway
  • PWY-6944
    • 2 reactions found over 25 reactions in the full pathway
  • PWY-6948
    • 2 reactions found over 18 reactions in the full pathway
  • PWY66-378
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-7299
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-4861
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6415
    • 4 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ18059&oldid=57389"