Difference between revisions of "SJ18078"
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(Created page with "Category:gene == Gene SJ09611 == * transcription-direction: ** negative * right-end-position: ** 169784 * left-end-position: ** 162718 * centisome-position: ** 39.720062...") |
(Created page with "Category:gene == Gene SJ22223 == * transcription-direction: ** positive * right-end-position: ** 88755 * left-end-position: ** 48960 * centisome-position: ** 27.30208...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ22223 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 88755 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 48960 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 27.30208 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[ASPARTATEKIN-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[HOMOSERDEHYDROG-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | + | ** Category: [[orthology]] | |
| − | ** Category: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | *** source: [[ | + | == Pathway(s) associated == |
| − | * [[ | + | * [[PWY-5097]] |
| − | ** | + | ** '''7''' reactions found over '''7''' reactions in the full pathway |
| − | *** | + | * [[PWY-6559]] |
| − | {{#set: transcription-direction= | + | ** '''2''' reactions found over '''4''' reactions in the full pathway |
| − | {{#set: right-end-position= | + | * [[P101-PWY]] |
| − | {{#set: left-end-position= | + | ** '''2''' reactions found over '''5''' reactions in the full pathway |
| − | {{#set: centisome-position= | + | * [[DAPLYSINESYN-PWY]] |
| + | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-2941]] | ||
| + | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-2942]] | ||
| + | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[PWY-6562]] | ||
| + | ** '''2''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[PWY-7153]] | ||
| + | ** '''4''' reactions found over '''8''' reactions in the full pathway | ||
| + | * [[HOMOSERSYN-PWY]] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=88755}} | ||
| + | {{#set: left-end-position=48960}} | ||
| + | {{#set: centisome-position=27.30208 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| + | {{#set: nb pathway associated=9}} | ||
Revision as of 13:07, 14 January 2021
Contents
Gene SJ22223
- transcription-direction:
- positive
- right-end-position:
- 88755
- left-end-position:
- 48960
- centisome-position:
- 27.30208
Organism(s) associated with this gene
Reaction(s) associated
- ASPARTATEKIN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- HOMOSERDEHYDROG-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-5097
- 7 reactions found over 7 reactions in the full pathway
- PWY-6559
- 2 reactions found over 4 reactions in the full pathway
- P101-PWY
- 2 reactions found over 5 reactions in the full pathway
- DAPLYSINESYN-PWY
- 7 reactions found over 9 reactions in the full pathway
- PWY-2941
- 6 reactions found over 9 reactions in the full pathway
- PWY-2942
- 6 reactions found over 7 reactions in the full pathway
- PWY-6562
- 2 reactions found over 6 reactions in the full pathway
- PWY-7153
- 4 reactions found over 8 reactions in the full pathway
- HOMOSERSYN-PWY
- 3 reactions found over 3 reactions in the full pathway
