Difference between revisions of "SJ18078"

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(Created page with "Category:gene == Gene SJ22223 == * transcription-direction: ** positive * right-end-position: ** 88755 * left-end-position: ** 48960 * centisome-position: ** 27.30208...")
(Created page with "Category:gene == Gene SJ12898 == * transcription-direction: ** negative * right-end-position: ** 298358 * left-end-position: ** 264217 * centisome-position: ** 75.49791...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ22223 ==
+
== Gene SJ12898 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 88755
+
** 298358
 
* left-end-position:
 
* left-end-position:
−
** 48960
+
** 264217
 
* centisome-position:
 
* centisome-position:
−
** 27.30208    
+
** 75.49791    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ASPARTATEKIN-RXN]]
+
* [[3.4.24.56-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[ATPASE-RXN]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
−
* [[HOMOSERDEHYDROG-RXN]]
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5097]]
+
* [[PWY-7210]]
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-6559]]
+
* [[PWY-7198]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[P101-PWY]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[DAPLYSINESYN-PWY]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-2941]]
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-2942]]
 
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6562]]
+
* [[PWY-7184]]
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7153]]
+
* [[PWY-6545]]
−
** '''4''' reactions found over '''8''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[HOMOSERSYN-PWY]]
+
{{#set: transcription-direction=negative}}
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
{{#set: right-end-position=298358}}
−
{{#set: transcription-direction=positive}}
+
{{#set: left-end-position=264217}}
−
{{#set: right-end-position=88755}}
+
{{#set: centisome-position=75.49791   }}
−
{{#set: left-end-position=48960}}
 
−
{{#set: centisome-position=27.30208   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=9}}
+
{{#set: nb pathway associated=4}}

Revision as of 18:52, 14 January 2021

Gene SJ12898

  • transcription-direction:
    • negative
  • right-end-position:
    • 298358
  • left-end-position:
    • 264217
  • centisome-position:
    • 75.49791

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ18078&oldid=97410"