Difference between revisions of "SJ18082"

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(Created page with "Category:gene == Gene SJ14435 == * transcription-direction: ** negative * right-end-position: ** 225901 * left-end-position: ** 216776 * centisome-position: ** 68.46977...")
(Created page with "Category:gene == Gene SJ18082 == * transcription-direction: ** positive * right-end-position: ** 141187 * left-end-position: ** 134350 * centisome-position: ** 53.13637...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ14435 ==
+
== Gene SJ18082 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 225901
+
** 141187
 
* left-end-position:
 
* left-end-position:
−
** 216776
+
** 134350
 
* centisome-position:
 
* centisome-position:
−
** 68.46977    
+
** 53.13637    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[CDPDIGLYSYN-RXN]]
−
* [[CYTOCHROME-C-PEROXIDASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[PEROXID-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12440]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-14240]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-15288]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-17352]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-3521]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-8635]]
+
* [[RXN0-5515]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-5981]]
−
* [[PWY-6959]]
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY0-1319]]
−
* [[PWY-6960]]
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
* [[PWY-5667]]
−
* [[PWY-6961]]
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
** '''1''' reactions found over '''8''' reactions in the full pathway
+
* [[PWY-7817]]
−
* [[PWY-7214]]
+
** '''6''' reactions found over '''16''' reactions in the full pathway
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
−
* [[PWY-7445]]
+
{{#set: right-end-position=141187}}
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
{{#set: left-end-position=134350}}
−
* [[PWY-5466]]
+
{{#set: centisome-position=53.13637   }}
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
* [[PWY-6824]]
+
{{#set: nb reaction associated=2}}
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
{{#set: nb pathway associated=4}}
−
* [[PWY-5469]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-2261]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5461]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=225901}}
 
−
{{#set: left-end-position=216776}}
 
−
{{#set: centisome-position=68.46977   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=8}}
 
−
{{#set: nb pathway associated=10}}
 

Latest revision as of 11:06, 18 March 2021

Gene SJ18082

  • transcription-direction:
    • positive
  • right-end-position:
    • 141187
  • left-end-position:
    • 134350
  • centisome-position:
    • 53.13637

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5981
    • 3 reactions found over 5 reactions in the full pathway
  • PWY0-1319
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5667
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7817
    • 6 reactions found over 16 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ18082&oldid=134634"