Difference between revisions of "SJ18082"

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(Created page with "Category:gene == Gene SJ13450 == * transcription-direction: ** positive * right-end-position: ** 436126 * left-end-position: ** 425411 * centisome-position: ** 58.388256...")
(Created page with "Category:gene == Gene SJ18082 == * transcription-direction: ** positive * right-end-position: ** 141187 * left-end-position: ** 134350 * centisome-position: ** 53.13637...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ13450 ==
+
== Gene SJ18082 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 436126
+
** 141187
 
* left-end-position:
 
* left-end-position:
−
** 425411
+
** 134350
 
* centisome-position:
 
* centisome-position:
−
** 58.388256    
+
** 53.13637    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[2PGADEHYDRAT-RXN]]
+
* [[CDPDIGLYSYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[3-DEHYDROQUINATE-DEHYDRATASE-RXN]]
+
* [[RXN0-5515]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-5981]]
−
* [[GLUCONEO-PWY]]
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY0-1319]]
−
* [[P124-PWY]]
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
** '''12''' reactions found over '''15''' reactions in the full pathway
+
* [[PWY-5667]]
−
* [[PWY-2221]]
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-7817]]
−
* [[NPGLUCAT-PWY]]
+
** '''6''' reactions found over '''16''' reactions in the full pathway
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-1622]]
 
−
** '''6''' reactions found over '''13''' reactions in the full pathway
 
−
* [[P122-PWY]]
 
−
** '''16''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-5484]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[P341-PWY]]
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
−
* [[GLYCOLYSIS]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[ANAGLYCOLYSIS-PWY]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY66-399]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-1042]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6142]]
 
−
** '''10''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-7003]]
 
−
** '''8''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6886]]
 
−
** '''8''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6901]]
 
−
** '''10''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7124]]
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5723]]
 
−
** '''10''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-7218]]
 
−
** '''7''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6707]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6163]]
 
−
** '''6''' reactions found over '''5''' reactions in the full pathway
 
−
* [[QUINATEDEG-PWY]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6416]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=436126}}
+
{{#set: right-end-position=141187}}
−
{{#set: left-end-position=425411}}
+
{{#set: left-end-position=134350}}
−
{{#set: centisome-position=58.388256   }}
+
{{#set: centisome-position=53.13637   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=2}}
 
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=23}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:06, 18 March 2021

Gene SJ18082

  • transcription-direction:
    • positive
  • right-end-position:
    • 141187
  • left-end-position:
    • 134350
  • centisome-position:
    • 53.13637

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5981
    • 3 reactions found over 5 reactions in the full pathway
  • PWY0-1319
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5667
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7817
    • 6 reactions found over 16 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ18082&oldid=134634"