Difference between revisions of "SJ18135"

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(Created page with "Category:gene == Gene SJ12870 == * transcription-direction: ** positive * right-end-position: ** 293758 * left-end-position: ** 273230 * centisome-position: ** 78.04074...")
(Created page with "Category:gene == Gene SJ18135 == * transcription-direction: ** positive * right-end-position: ** 151379 * left-end-position: ** 146384 * centisome-position: ** 58.12949...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ12870 ==
+
== Gene SJ18135 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 293758
+
** 151379
 
* left-end-position:
 
* left-end-position:
−
** 273230
+
** 146384
 
* centisome-position:
 
* centisome-position:
−
** 78.04074    
+
** 58.12949    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
+
* [[CARBODEHYDRAT-RXN]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[BIOTIN-CARBOXYL-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[DALADALALIG-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[PROPIONYL-COA-CARBOXY-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN1G-4355]]
+
* [[RXN0-5224]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7115]]
−
* [[PWY-7388]]
+
** '''9''' reactions found over '''11''' reactions in the full pathway
−
** '''7''' reactions found over '''11''' reactions in the full pathway
+
* [[PWY-7117]]
−
* [[PWY-6679]]
+
** '''10''' reactions found over '''14''' reactions in the full pathway
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-6142]]
 +
** '''10''' reactions found over '''13''' reactions in the full pathway
 
* [[PWY-5744]]
 
* [[PWY-5744]]
 
** '''4''' reactions found over '''13''' reactions in the full pathway
 
** '''4''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWYQT-4429]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[CYANCAT-PWY]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5789]]
 +
** '''8''' reactions found over '''18''' reactions in the full pathway
 
* [[PWY-5743]]
 
* [[PWY-5743]]
 
** '''5''' reactions found over '''13''' reactions in the full pathway
 
** '''5''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-5789]]
+
* [[PWY-241]]
−
** '''8''' reactions found over '''18''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY0-1264]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7953]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6386]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6387]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PROPIONMET-PWY]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6728]]
 
−
** '''11''' reactions found over '''19''' reactions in the full pathway
 
−
* [[PWY-7384]]
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWYG-321]]
 
−
** '''26''' reactions found over '''182''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=293758}}
+
{{#set: right-end-position=151379}}
−
{{#set: left-end-position=273230}}
+
{{#set: left-end-position=146384}}
−
{{#set: centisome-position=78.04074   }}
+
{{#set: centisome-position=58.12949   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=13}}
+
{{#set: nb pathway associated=9}}

Latest revision as of 11:03, 18 March 2021

Gene SJ18135

  • transcription-direction:
    • positive
  • right-end-position:
    • 151379
  • left-end-position:
    • 146384
  • centisome-position:
    • 58.12949

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7115
    • 9 reactions found over 11 reactions in the full pathway
  • PWY-7117
    • 10 reactions found over 14 reactions in the full pathway
  • PWY-6142
    • 10 reactions found over 13 reactions in the full pathway
  • PWY-5744
    • 4 reactions found over 13 reactions in the full pathway
  • PWYQT-4429
    • 2 reactions found over 2 reactions in the full pathway
  • CYANCAT-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5789
    • 8 reactions found over 18 reactions in the full pathway
  • PWY-5743
    • 5 reactions found over 13 reactions in the full pathway
  • PWY-241
    • 5 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ18135&oldid=132909"