Difference between revisions of "SJ18138"
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(Created page with "Category:gene == Gene SJ18138 == * transcription-direction: ** negative * right-end-position: ** 228969 * left-end-position: ** 215058 * centisome-position: ** 85.40012...") |
(Created page with "Category:gene == Gene SJ11284 == * transcription-direction: ** positive * right-end-position: ** 160916 * left-end-position: ** 127533 * centisome-position: ** 16.276161...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ11284 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 160916 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 127533 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 16.276161 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | + | * [[2.7.11.24-RXN]] | |
| − | * [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | * [[RXN | + | * [[PROTEIN-KINASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[RXN- | + | * [[RXN-8443]] |
| − | ** Category: [[ | + | ** Category: [[orthology]] |
| − | *** source: [[ | + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
| − | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | *** source: [[ | ||
| − | |||
| − | |||
| − | |||
| − | |||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-5381]] |
| − | ** '''6''' reactions found over ''' | + | ** '''6''' reactions found over '''11''' reactions in the full pathway |
| − | + | {{#set: transcription-direction=positive}} | |
| − | + | {{#set: right-end-position=160916}} | |
| − | {{#set: transcription-direction= | + | {{#set: left-end-position=127533}} |
| − | {{#set: right-end-position= | + | {{#set: centisome-position=16.276161 }} |
| − | {{#set: left-end-position= | ||
| − | {{#set: centisome-position= | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
Revision as of 11:04, 15 January 2021
Contents
Gene SJ11284
- transcription-direction:
- positive
- right-end-position:
- 160916
- left-end-position:
- 127533
- centisome-position:
- 16.276161
Organism(s) associated with this gene
Reaction(s) associated
- 2.7.11.24-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- PROTEIN-KINASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-8443
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-5381
- 6 reactions found over 11 reactions in the full pathway
