Difference between revisions of "SJ18138"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-10244 CPD-10244] == * common-name: ** docosahexaenoate * smiles: ** ccc=ccc=ccc=ccc=ccc=ccc...")
(Created page with "Category:gene == Gene SJ18138 == * transcription-direction: ** negative * right-end-position: ** 228969 * left-end-position: ** 215058 * centisome-position: ** 85.40012...")
 
(8 intermediate revisions by 4 users not shown)
Line 1: Line 1:
−
[[Category:metabolite]]
+
[[Category:gene]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-10244 CPD-10244] ==
+
== Gene SJ18138 ==
−
* common-name:
+
* transcription-direction:
−
** docosahexaenoate
+
** negative
−
* smiles:
+
* right-end-position:
−
** ccc=ccc=ccc=ccc=ccc=ccc=cccc(=o)[o-]
+
** 228969
−
* inchi-key:
+
* left-end-position:
−
** mbmbgcfofbjsgt-kubavdmbsa-m
+
** 215058
−
* molecular-weight:
+
* centisome-position:
−
** 327.486
+
** 85.40012   
−
== Reaction(s) known to consume the compound ==
+
== Organism(s) associated with this gene  ==
−
* [[RXN-16063]]
+
* [[S.japonica_carotenoid_curated]]
−
== Reaction(s) known to produce the compound ==
+
== Reaction(s) associated ==
−
* [[RXN-16017]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[RXN-16063]]
+
* [[3.4.11.18-RXN]]
−
* [[RXN-16138]]
+
** Category: [[annotation]]
−
== Reaction(s) of unknown directionality ==
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: common-name=docosahexaenoate}}
+
** Category: [[orthology]]
−
{{#set: inchi-key=inchikey=mbmbgcfofbjsgt-kubavdmbsa-m}}
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
{{#set: molecular-weight=327.486}}
+
* [[RXN-17873]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17874]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17875]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17876]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17877]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17878]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
* [[PWY-7800]]
 +
** '''6''' reactions found over '''21''' reactions in the full pathway
 +
* [[PWY-7799]]
 +
** '''7''' reactions found over '''14''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=228969}}
 +
{{#set: left-end-position=215058}}
 +
{{#set: centisome-position=85.40012    }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=7}}
 +
{{#set: nb pathway associated=2}}

Latest revision as of 11:03, 18 March 2021

Gene SJ18138

  • transcription-direction:
    • negative
  • right-end-position:
    • 228969
  • left-end-position:
    • 215058
  • centisome-position:
    • 85.40012

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7800
    • 6 reactions found over 21 reactions in the full pathway
  • PWY-7799
    • 7 reactions found over 14 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ18138&oldid=132983"