Difference between revisions of "SJ18138"

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(Created page with "Category:gene == Gene SJ18687 == * transcription-direction: ** positive * right-end-position: ** 98594 * left-end-position: ** 72867 * centisome-position: ** 30.488157...")
(Created page with "Category:gene == Gene SJ18138 == * transcription-direction: ** negative * right-end-position: ** 228969 * left-end-position: ** 215058 * centisome-position: ** 85.40012...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ18687 ==
+
== Gene SJ18138 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 98594
+
** 228969
 
* left-end-position:
 
* left-end-position:
−
** 72867
+
** 215058
 
* centisome-position:
 
* centisome-position:
−
** 30.488157    
+
** 85.40012    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[3.6.3.35-RXN]]
+
* [[3.4.11.18-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[3.6.3.8-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-17873]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[ATPASE-RXN]]
+
* [[RXN-17874]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* [[RXN-17875]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12195]]
+
* [[RXN-17876]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12196]]
+
* [[RXN-17877]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-5462]]
+
* [[RXN-17878]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[TRANS-RXN-193]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6545]]
+
* [[PWY-7800]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''6''' reactions found over '''21''' reactions in the full pathway
−
* [[PWY-7210]]
+
* [[PWY-7799]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''7''' reactions found over '''14''' reactions in the full pathway
−
* [[PWY-7198]]
+
{{#set: transcription-direction=negative}}
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
{{#set: right-end-position=228969}}
−
* [[PWY-7184]]
+
{{#set: left-end-position=215058}}
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
{{#set: centisome-position=85.40012   }}
−
{{#set: transcription-direction=positive}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: right-end-position=98594}}
+
{{#set: nb reaction associated=7}}
−
{{#set: left-end-position=72867}}
+
{{#set: nb pathway associated=2}}
−
{{#set: centisome-position=30.488157   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=8}}
 
−
{{#set: nb pathway associated=4}}
 

Latest revision as of 11:03, 18 March 2021

Gene SJ18138

  • transcription-direction:
    • negative
  • right-end-position:
    • 228969
  • left-end-position:
    • 215058
  • centisome-position:
    • 85.40012

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7800
    • 6 reactions found over 21 reactions in the full pathway
  • PWY-7799
    • 7 reactions found over 14 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ18138&oldid=132983"