Difference between revisions of "SJ18138"
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(Created page with "Category:gene == Gene SJ11284 == * transcription-direction: ** positive * right-end-position: ** 160916 * left-end-position: ** 127533 * centisome-position: ** 16.276161...") |
(Created page with "Category:gene == Gene SJ18138 == * transcription-direction: ** negative * right-end-position: ** 228969 * left-end-position: ** 215058 * centisome-position: ** 85.40012...") |
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[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ18138 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 228969 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 215058 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 85.40012 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
| + | * [[3.4.11.18-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | * [[ | + | * [[RXN-17873]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[RXN- | + | * [[RXN-17874]] |
| − | ** Category: [[ | + | ** Category: [[annotation]] |
| − | *** source: [[ | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| − | *** source: [[ | + | * [[RXN-17875]] |
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-17876]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-17877]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-17878]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-7800]] |
| − | ** '''6''' reactions found over ''' | + | ** '''6''' reactions found over '''21''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[PWY-7799]] |
| − | {{#set: right-end-position= | + | ** '''7''' reactions found over '''14''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | {{#set: transcription-direction=negative}} |
| − | {{#set: centisome-position= | + | {{#set: right-end-position=228969}} |
| + | {{#set: left-end-position=215058}} | ||
| + | {{#set: centisome-position=85.40012 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=7}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=2}} |
Latest revision as of 11:03, 18 March 2021
Contents
Gene SJ18138
- transcription-direction:
- negative
- right-end-position:
- 228969
- left-end-position:
- 215058
- centisome-position:
- 85.40012
Organism(s) associated with this gene
Reaction(s) associated
- 3.4.11.18-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-17873
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-17874
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-17875
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-17876
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-17877
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-17878
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7800
- 6 reactions found over 21 reactions in the full pathway
- PWY-7799
- 7 reactions found over 14 reactions in the full pathway
