Difference between revisions of "SJ18142"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ01789 == * transcription-direction: ** negative * right-end-position: ** 82469 * left-end-position: ** 78840 * centisome-position: ** 54.10228...")
(Created page with "Category:gene == Gene SJ18142 == * transcription-direction: ** negative * right-end-position: ** 58790 * left-end-position: ** 47111 * centisome-position: ** 18.707907...")
 
(4 intermediate revisions by 3 users not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ01789 ==
+
== Gene SJ18142 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 82469
+
** 58790
 
* left-end-position:
 
* left-end-position:
−
** 78840
+
** 47111
 
* centisome-position:
 
* centisome-position:
−
** 54.10228    
+
** 18.707907    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[CARBODEHYDRAT-RXN]]
−
* [[3.1.1.64-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[CARBOXYLESTERASE-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
+
* [[RXN0-5224]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10711]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10767]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12252]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12575]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-15041]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXNQT-4366]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6303]]
+
* [[PWY-7115]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''9''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-6857]]
+
* [[PWY-7117]]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''10''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY-6142]]
 +
** '''10''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5744]]
 +
** '''4''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWYQT-4429]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[CYANCAT-PWY]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5789]]
 +
** '''8''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-5743]]
 +
** '''5''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-241]]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=82469}}
+
{{#set: right-end-position=58790}}
−
{{#set: left-end-position=78840}}
+
{{#set: left-end-position=47111}}
−
{{#set: centisome-position=54.10228   }}
+
{{#set: centisome-position=18.707907   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=9}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=9}}

Latest revision as of 11:06, 18 March 2021

Gene SJ18142

  • transcription-direction:
    • negative
  • right-end-position:
    • 58790
  • left-end-position:
    • 47111
  • centisome-position:
    • 18.707907

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7115
    • 9 reactions found over 11 reactions in the full pathway
  • PWY-7117
    • 10 reactions found over 14 reactions in the full pathway
  • PWY-6142
    • 10 reactions found over 13 reactions in the full pathway
  • PWY-5744
    • 4 reactions found over 13 reactions in the full pathway
  • PWYQT-4429
    • 2 reactions found over 2 reactions in the full pathway
  • CYANCAT-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5789
    • 8 reactions found over 18 reactions in the full pathway
  • PWY-5743
    • 5 reactions found over 13 reactions in the full pathway
  • PWY-241
    • 5 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ18142&oldid=134399"