Difference between revisions of "SJ18156"

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(Created page with "Category:gene == Gene SJ04728 == * transcription-direction: ** positive * right-end-position: ** 315846 * left-end-position: ** 308870 * centisome-position: ** 61.02703...")
(Created page with "Category:gene == Gene SJ20190 == * transcription-direction: ** negative * right-end-position: ** 126495 * left-end-position: ** 116103 * centisome-position: ** 54.946995...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04728 ==
+
== Gene SJ20190 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 315846
+
** 126495
 
* left-end-position:
 
* left-end-position:
−
** 308870
+
** 116103
 
* centisome-position:
 
* centisome-position:
−
** 61.02703    
+
** 54.946995    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PHOSACETYLTRANS-RXN]]
+
* [[GLUTAMATE-SYNTHASE-NADH-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[GLUTAMATESYN-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[GLUTAMIN-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[GLUTDEHYD-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[PWY-5482]]
+
* [[PWY-6963]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY0-1312]]
+
* [[GLUGLNSYN-PWY]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[P122-PWY]]
+
* [[GLUTSYN-PWY]]
−
** '''16''' reactions found over '''18''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[P163-PWY]]
+
* [[GLUTAMINEFUM-PWY]]
−
** '''3''' reactions found over '''10''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-5485]]
+
* [[CITRULBIO-PWY]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''7''' reactions found over '''8''' reactions in the full pathway
−
* [[FERMENTATION-PWY]]
+
* [[GLUTAMINDEG-PWY]]
−
** '''11''' reactions found over '''16''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[P3-PWY]]
+
* [[GLUTSYNIII-PWY]]
−
** '''3''' reactions found over '''11''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY4LZ-257]]
+
* [[PWY-5675]]
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[METH-ACETATE-PWY]]
+
* [[PWY490-3]]
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-1281]]
+
* [[PWY-5913]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''10''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-6637]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[P161-PWY]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5497]]
 
−
** '''10''' reactions found over '''24''' reactions in the full pathway
 
 
</div>
 
</div>
−
{{#set: transcription-direction=positive}}
+
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=315846}}
+
{{#set: right-end-position=126495}}
−
{{#set: left-end-position=308870}}
+
{{#set: left-end-position=116103}}
−
{{#set: centisome-position=61.02703   }}
+
{{#set: centisome-position=54.946995   }}
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
{{#set: organism associated=S.japonica_sterols_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=13}}
+
{{#set: nb pathway associated=10}}

Revision as of 20:24, 18 December 2020

Gene SJ20190

  • transcription-direction:
    • negative
  • right-end-position:
    • 126495
  • left-end-position:
    • 116103
  • centisome-position:
    • 54.946995

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6963
    • 4 reactions found over 2 reactions in the full pathway
  • GLUGLNSYN-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • GLUTSYN-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • GLUTAMINEFUM-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • CITRULBIO-PWY
    • 7 reactions found over 8 reactions in the full pathway
  • GLUTAMINDEG-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • GLUTSYNIII-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5675
    • 4 reactions found over 4 reactions in the full pathway
  • PWY490-3
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5913
    • 10 reactions found over 11 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ18156&oldid=43040"