Difference between revisions of "SJ18156"
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(Created page with "Category:gene == Gene SJ16599 == * transcription-direction: ** negative * right-end-position: ** 364127 * left-end-position: ** 337018 * centisome-position: ** 49.31309...") |
(Created page with "Category:gene == Gene SJ04728 == * transcription-direction: ** positive * right-end-position: ** 315846 * left-end-position: ** 308870 * centisome-position: ** 61.02703...") |
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[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ04728 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 315846 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 308870 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 61.02703 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[PHOSACETYLTRANS-RXN]] |
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
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** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | ** ''' | + | * [[PWY-5482]] |
− | * [[PWY- | + | ** '''2''' reactions found over '''3''' reactions in the full pathway |
− | ** '''6''' reactions found over ''' | + | * [[PWY0-1312]] |
− | * [[PWY- | + | ** '''1''' reactions found over '''2''' reactions in the full pathway |
− | ** ''' | + | * [[P122-PWY]] |
− | * [[PWY- | + | ** '''16''' reactions found over '''18''' reactions in the full pathway |
− | ** ''' | + | * [[P163-PWY]] |
− | {{#set: transcription-direction= | + | ** '''3''' reactions found over '''10''' reactions in the full pathway |
− | {{#set: right-end-position= | + | * [[PWY-5485]] |
− | {{#set: left-end-position= | + | ** '''2''' reactions found over '''3''' reactions in the full pathway |
− | {{#set: centisome-position= | + | * [[FERMENTATION-PWY]] |
+ | ** '''11''' reactions found over '''16''' reactions in the full pathway | ||
+ | * [[P3-PWY]] | ||
+ | ** '''3''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY4LZ-257]] | ||
+ | ** '''7''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[METH-ACETATE-PWY]] | ||
+ | ** '''1''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-1281]] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-6637]] | ||
+ | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[P161-PWY]] | ||
+ | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-5497]] | ||
+ | ** '''10''' reactions found over '''24''' reactions in the full pathway | ||
+ | </div> | ||
+ | {{#set: transcription-direction=positive}} | ||
+ | {{#set: right-end-position=315846}} | ||
+ | {{#set: left-end-position=308870}} | ||
+ | {{#set: centisome-position=61.02703 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=1}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=13}} |
Revision as of 09:25, 27 August 2019
Contents
Gene SJ04728
- transcription-direction:
- positive
- right-end-position:
- 315846
- left-end-position:
- 308870
- centisome-position:
- 61.02703
Organism(s) associated with this gene
Reaction(s) associated
- PHOSACETYLTRANS-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-5482
- 2 reactions found over 3 reactions in the full pathway
- PWY0-1312
- 1 reactions found over 2 reactions in the full pathway
- P122-PWY
- 16 reactions found over 18 reactions in the full pathway
- P163-PWY
- 3 reactions found over 10 reactions in the full pathway
- PWY-5485
- 2 reactions found over 3 reactions in the full pathway
- FERMENTATION-PWY
- 11 reactions found over 16 reactions in the full pathway
- P3-PWY
- 3 reactions found over 11 reactions in the full pathway
- PWY4LZ-257
- 7 reactions found over 7 reactions in the full pathway
- METH-ACETATE-PWY
- 1 reactions found over 6 reactions in the full pathway
- PWY-1281
- 1 reactions found over 2 reactions in the full pathway
- PWY-6637
- 1 reactions found over 4 reactions in the full pathway
- P161-PWY
- 2 reactions found over 5 reactions in the full pathway
- PWY-5497
- 10 reactions found over 24 reactions in the full pathway