Difference between revisions of "SJ18171"

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(Created page with "Category:gene == Gene SJ13192 == * transcription-direction: ** negative * right-end-position: ** 146117 * left-end-position: ** 135369 * centisome-position: ** 39.26903...")
(Created page with "Category:gene == Gene SJ00834 == * transcription-direction: ** positive * right-end-position: ** 537681 * left-end-position: ** 535749 * centisome-position: ** 95.86016...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ13192 ==
+
== Gene SJ00834 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 146117
+
** 537681
 
* left-end-position:
 
* left-end-position:
−
** 135369
+
** 535749
 
* centisome-position:
 
* centisome-position:
−
** 39.26903    
+
** 95.86016    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[1.14.21.6-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=negative}}
+
* [[RXN-11887]]
−
{{#set: right-end-position=146117}}
+
** Category: [[annotation]]
−
{{#set: left-end-position=135369}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: centisome-position=39.26903   }}
+
* [[RXN-13883]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13892]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16378]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-4209]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN3O-218]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
* [[PWY66-341]]
 +
** '''14''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY66-3]]
 +
** '''12''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY66-4]]
 +
** '''14''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7154]]
 +
** '''2''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-7155]]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-2541]]
 +
** '''11''' reactions found over '''35''' reactions in the full pathway
 +
* [[PWY-6075]]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=537681}}
 +
{{#set: left-end-position=535749}}
 +
{{#set: centisome-position=95.86016   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=7}}
 +
{{#set: nb pathway associated=7}}

Revision as of 15:22, 5 January 2021

Gene SJ00834

  • transcription-direction:
    • positive
  • right-end-position:
    • 537681
  • left-end-position:
    • 535749
  • centisome-position:
    • 95.86016

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY66-341
    • 14 reactions found over 18 reactions in the full pathway
  • PWY66-3
    • 12 reactions found over 18 reactions in the full pathway
  • PWY66-4
    • 14 reactions found over 4 reactions in the full pathway
  • PWY-7154
    • 2 reactions found over 11 reactions in the full pathway
  • PWY-7155
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-2541
    • 11 reactions found over 35 reactions in the full pathway
  • PWY-6075
    • 3 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ18171&oldid=70590"