Difference between revisions of "SJ18185"

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(Created page with "Category:gene == Gene SJ00800 == * transcription-direction: ** negative * right-end-position: ** 157112 * left-end-position: ** 147025 * centisome-position: ** 91.09581...")
(Created page with "Category:gene == Gene SJ00407 == * transcription-direction: ** positive * right-end-position: ** 36681 * left-end-position: ** 20437 * centisome-position: ** 3.5989377...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ00800 ==
+
== Gene SJ00407 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 157112
+
** 36681
 
* left-end-position:
 
* left-end-position:
−
** 147025
+
** 20437
 
* centisome-position:
 
* centisome-position:
−
** 91.09581    
+
** 3.5989377    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PEROXID-RXN]]
+
* [[1.5.1.20-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-14240]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-15288]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17352]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-8635]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[MTHFO]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[MTHFO_LPAREN_nadp_RPAREN_]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7214]]
+
* [[1CMET2-PWY]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7445]]
+
* [[PWY-3841]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''9''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-5466]]
+
* [[PWY-2201]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''9''' reactions found over '''12''' reactions in the full pathway
−
* [[PWY-6824]]
+
* [[CODH-PWY]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''4''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5469]]
+
{{#set: transcription-direction=positive}}
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
{{#set: right-end-position=36681}}
−
* [[PWY-5461]]
+
{{#set: left-end-position=20437}}
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
{{#set: centisome-position=3.5989377   }}
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=157112}}
 
−
{{#set: left-end-position=147025}}
 
−
{{#set: centisome-position=91.09581   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=4}}

Revision as of 09:26, 27 August 2019

Gene SJ00407

  • transcription-direction:
    • positive
  • right-end-position:
    • 36681
  • left-end-position:
    • 20437
  • centisome-position:
    • 3.5989377

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • 1CMET2-PWY
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-3841
    • 9 reactions found over 11 reactions in the full pathway
  • PWY-2201
    • 9 reactions found over 12 reactions in the full pathway
  • CODH-PWY
    • 4 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ18185&oldid=31161"