Difference between revisions of "SJ18229"

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(Created page with "Category:gene == Gene SJ20976 == * transcription-direction: ** positive * right-end-position: ** 75696 * left-end-position: ** 61598 * centisome-position: ** 30.591742...")
(Created page with "Category:gene == Gene SJ18816 == * transcription-direction: ** negative * right-end-position: ** 33884 * left-end-position: ** 26320 * centisome-position: ** 11.170055...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ20976 ==
+
== Gene SJ18816 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 75696
+
** 33884
 
* left-end-position:
 
* left-end-position:
−
** 61598
+
** 26320
 
* centisome-position:
 
* centisome-position:
−
** 30.591742    
+
** 11.170055    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ADPSUGPPHOSPHAT-RXN]]
−
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN]]
+
* [[PYRIMSYN1-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-10949]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10952]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-10953]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10954]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-7253]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN0-5408]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXNQT-4142]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-2301]]
+
* [[PWY-6890]]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6363]]
+
{{#set: transcription-direction=negative}}
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
{{#set: right-end-position=33884}}
−
* [[PWY-4702]]
+
{{#set: left-end-position=26320}}
−
** '''3''' reactions found over '''14''' reactions in the full pathway
+
{{#set: centisome-position=11.170055   }}
−
* [[PWY-882]]
 
−
** '''6''' reactions found over '''8''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=75696}}
 
−
{{#set: left-end-position=61598}}
 
−
{{#set: centisome-position=30.591742   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=9}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=1}}

Revision as of 08:21, 15 March 2021

Gene SJ18816

  • transcription-direction:
    • negative
  • right-end-position:
    • 33884
  • left-end-position:
    • 26320
  • centisome-position:
    • 11.170055

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6890
    • 2 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ18229&oldid=122589"