Difference between revisions of "SJ18316"
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(Created page with "Category:gene == Gene SJ01231 == * transcription-direction: ** negative * right-end-position: ** 212321 * left-end-position: ** 190540 * centisome-position: ** 34.431538...") |
(Created page with "Category:gene == Gene SJ20910 == * transcription-direction: ** positive * right-end-position: ** 77261 * left-end-position: ** 59072 * centisome-position: ** 29.213339...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ20910 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 77261 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 59072 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 29.213339 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[2.1.1.127-RXN]] |
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-13588]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-5532]] |
| − | ** ''' | + | ** '''4''' reactions found over '''10''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-5723]] |
| − | ** ''' | + | ** '''10''' reactions found over '''10''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[CALVIN-PWY]] |
| − | {{#set: right-end-position= | + | ** '''12''' reactions found over '''13''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | {{#set: transcription-direction=positive}} |
| − | {{#set: centisome-position= | + | {{#set: right-end-position=77261}} |
| + | {{#set: left-end-position=59072}} | ||
| + | {{#set: centisome-position=29.213339 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Revision as of 11:07, 15 January 2021
Contents
Gene SJ20910
- transcription-direction:
- positive
- right-end-position:
- 77261
- left-end-position:
- 59072
- centisome-position:
- 29.213339
Organism(s) associated with this gene
Reaction(s) associated
- 2.1.1.127-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-13588
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-5532
- 4 reactions found over 10 reactions in the full pathway
- PWY-5723
- 10 reactions found over 10 reactions in the full pathway
- CALVIN-PWY
- 12 reactions found over 13 reactions in the full pathway
