Difference between revisions of "SJ18341"
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(Created page with "Category:gene == Gene SJ07132 == * transcription-direction: ** negative * right-end-position: ** 84492 * left-end-position: ** 77822 * centisome-position: ** 16.760279...") |
(Created page with "Category:gene == Gene SJ14668 == * transcription-direction: ** negative * right-end-position: ** 142204 * left-end-position: ** 120668 * centisome-position: ** 38.84509...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ14668 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 142204 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 120668 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 38.84509 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | + | * [[PEPCARBOXYKIN-RXN]] | |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | * [[ | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | |||
| − | |||
| − | |||
| − | |||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[ | + | * [[PWY-7117]] |
| − | ** ''' | + | ** '''10''' reactions found over '''12''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-561]] |
| − | ** ''' | + | ** '''6''' reactions found over '''4''' reactions in the full pathway |
| − | + | * [[GLUCONEO-PWY]] | |
| − | + | ** '''12''' reactions found over '''13''' reactions in the full pathway | |
| − | * [[ | ||
| − | ** ''' | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=142204}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=120668}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=38.84509 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=1}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Revision as of 18:50, 14 January 2021
Contents
Gene SJ14668
- transcription-direction:
- negative
- right-end-position:
- 142204
- left-end-position:
- 120668
- centisome-position:
- 38.84509
Organism(s) associated with this gene
Reaction(s) associated
- PEPCARBOXYKIN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7117
- 10 reactions found over 12 reactions in the full pathway
- PWY-561
- 6 reactions found over 4 reactions in the full pathway
- GLUCONEO-PWY
- 12 reactions found over 13 reactions in the full pathway
