Difference between revisions of "SJ18388"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ02517 == * transcription-direction: ** negative * right-end-position: ** 46639 * left-end-position: ** 3400 * centisome-position: ** 2.526322 =...")
(Created page with "Category:gene == Gene SJ18388 == * transcription-direction: ** positive * right-end-position: ** 245371 * left-end-position: ** 235866 * centisome-position: ** 95.4274...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02517 ==
+
== Gene SJ18388 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 46639
+
** 245371
 
* left-end-position:
 
* left-end-position:
−
** 3400
+
** 235866
 
* centisome-position:
 
* centisome-position:
−
** 2.526322    
+
** 95.4274    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ATPASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[GPPSYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* [[RXN-11488]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12195]]
+
* [[RXN-11963]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12196]]
+
* [[RXN-8999]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN0-5462]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-9969]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5180]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6545]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-6383]]
−
* [[PWY-7210]]
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
* [[PWY-7410]]
−
* [[PWY-7198]]
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
* [[PWY-7102]]
−
* [[PWY-7184]]
+
** '''3''' reactions found over '''6''' reactions in the full pathway
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-6859]]
−
{{#set: transcription-direction=negative}}
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
{{#set: right-end-position=46639}}
+
* [[PWY-7736]]
−
{{#set: left-end-position=3400}}
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
{{#set: centisome-position=2.526322   }}
+
* [[PWY-5122]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-7141]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7659]]
 +
** '''1''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7709]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5123]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7182]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5785]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6129]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5815]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=245371}}
 +
{{#set: left-end-position=235866}}
 +
{{#set: centisome-position=95.4274   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=14}}

Latest revision as of 11:04, 18 March 2021

Gene SJ18388

  • transcription-direction:
    • positive
  • right-end-position:
    • 245371
  • left-end-position:
    • 235866
  • centisome-position:
    • 95.4274

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6383
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7410
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7102
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-6859
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7736
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5122
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7141
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7659
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-7709
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5123
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7182
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5785
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6129
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5815
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ18388&oldid=133285"